Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2881 ATGAGAATGACCCCTACTGGTATTGGTTATGGAGGCGAAATGGAGTGTTGCAAGTTACTGCAGAACCAGAGCAAGGAGGTAGCGGCTGAAGCAGTAGCAATGGCTCCCAAGCAGAGAACACCAAAGGTGAGCAGGAATCCCGAATTGATTAGAGGGATTGGTAAGTACACGAGGTCCCAGATGTACCACAAGAGAGGACTTTGGGCTATCAAGGCCAAAAATGGTGGCGTTTTCCCTCGTCACGATCCTAAGCCAAAGCCTGAAGCACCTGCGGAGAAAGCTCCCAAGTTTTATCCCGCTGATGATGTCAAGAAGCCCTTGGTCAACAAGCACAAGCCGAAGCCTACTAAGCTCAGGGCTAGCATAACTCCGGGCACTGTGCTGATTCTTCTTGCTGGGAGATTCAAGGGAAAGAGAGTAGTTTTTCTGAAGCAGCTTCCTTCTGGACTGCTCCTTGTTACTGGTCCATTTAAGATCAATGGAGTTCCTTTGAGACGTGTATGCCAATCTTACGTCATTGGCACCTCCACAAAGGTTGATATTTCTGGTGTCAATGTTGAGAAATTTGACGACAAGTACTTTGCCAAGAAGACTGAAAAGAAGAAGAGTAAAACTGAAGGAGAGTTTTTTGAGGCCGAAAAGGAGGAGAAGAGTGTGATCCCCCAAGAGAAGAAGGATGACCAGAAAACCGTGGATTCTGCTTTGTTAAAAGCCATTGAGAGCGTCCCAGATTTGAAGGCTTATTTGGGTGCAAGGTTCTCTCTCAAGGCTGGCATGAAGCCTCATGAACTAGTCTTCTAA 801 0.4694 MRMTPTGIGYGGEMECCKLLQNQSKEVAAEAVAMAPKQRTPKVSRNPELIRGIGKYTRSQMYHKRGLWAIKAKNGGVFPRHDPKPKPEAPAEKAPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVCQSYVIGTSTKVDISGVNVEKFDDKYFAKKTEKKKSKTEGEFFEAEKEEKSVIPQEKKDDQKTVDSALLKAIESVPDLKAYLGARFSLKAGMKPHELVF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2881 266 FunFam 60S ribosomal protein L6 120 204 - -
Acco01g2881 266 Pfam Ribosomal protein L6, N-terminal domain 36 93 IPR005568 GO:0003735|GO:0005840|GO:0006412
Acco01g2881 266 Gene3D - 120 204 IPR014722 -
Acco01g2881 266 Pfam Ribosomal protein L6e 159 266 IPR000915 GO:0003735|GO:0005840|GO:0006412
Acco01g2881 266 SUPERFAMILY Translation proteins SH3-like domain 120 205 IPR008991 -
Acco01g2881 266 Coils Coil 195 215 - -
Acco01g2881 266 PANTHER 60S RIBOSOMAL PROTEIN L6 36 266 IPR000915 GO:0003735|GO:0005840|GO:0006412
Acco01g2881 266 CDD KOW_RPL6 114 266 IPR041997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2881 Acco-ChrAcco01 46049506 46052109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2881 34 266 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 83.262 7.33e-127 358