Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2879 ATGGTTCGCAATGGCGTCCGGCTCATCAGATGGGCAGCTCGATCTTTCGCTTCAAAAGCAGCCAACAATATATACGAGGCTTCTGTCTCCCGAAGAGGTTATCGGACAATTAATTCAGGGGTTTTCCAGCGTTACCCTTCAAATGTTGGAGATGCTCTTTCGTTGAAGACCAGAATGCTATTGGGAGCAAGATCCATTCATGGCACGGCTTCATTGGTGAGAGATTACTATGACGTCCTTGGAGTGAACAGGAACGCAAGCTCTTCCGAAATAAAGAAAGCATATTATGGGCTTGCAAAGCAGCTCCACCCAGATACAAACAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCGATGGCATATGAGGTTTTGAAGGATGAGGAGAAGCGGCAACAATATGATCAGGTTGGCCATGATGCCTATGTAAATCAACAAAGCAATGGTTTTGGCGGTGGTGATGCTGGCTTTAATCCATTTGAGCAGATATTCCGTGATCATGATTTTGTCAAGAACTTTTTTCATCAAAATGTTGGTGGAGAAGATGTCAAGACCTTTGTTGAACTATCATTTATGGAAGCTGTTCAAGGATGCACCAAAACTGTGTCATTTCAAACTGATGTGCTTTGTAATGCTTGCGGTGGTAGTGGCGTTCCTCCTGGAACAAGACCTGAAACTTGCAAGCGCTGTAAAGGGTCTGGTGTGAATTATGTACAAGCTGGCATATTTAGGATGGAGAGTACATGCACCACATGCAAGGGAACTGGAAAAATTGTATCGAGCTTCTGCAAGTCTTGCAGGGGTGCAAAGGTTATCAAAGGAACAAAGTCAGTCAAGTTGGATTTCACGCCTGGGATAGACAACAATGAGACTTTAAAAGTTTATAGAAGTGGTGGAGCAGACCCTGATGGAGATCAGCCAGGTGACCTTTACGTAATTGTCAGGGTTAGGGAAGACCCTGTTTTCCGGAGAGAAGGATCTGACATTCATGTGGATGCTGTCTTGAGCATCACTCAGGCAATTTTGGGGGGTACCATTCAGGTCCCCACCCTTACTGGAGATGTTGTTCTCAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTGTTGAAAAAGAAAGGGATCAAAACTAAAAATTCGTGGTCGTTCGGGGATCAATTTGTTCATTTTAATGTCAGCATCCCAACAAACCTGACGCAGAGACAGCGTGAATTAATCGAGGAATTTGCCAAGGAAGAGCAAGGGGAAGATTTTAAGCAGAGAGCTGCTTCAGGTTCTGGATGA 1293 0.447 MVRNGVRLIRWAARSFASKAANNIYEASVSRRGYRTINSGVFQRYPSNVGDALSLKTRMLLGARSIHGTASLVRDYYDVLGVNRNASSSEIKKAYYGLAKQLHPDTNKDDPEAEKKFQEVSMAYEVLKDEEKRQQYDQVGHDAYVNQQSNGFGGGDAGFNPFEQIFRDHDFVKNFFHQNVGGEDVKTFVELSFMEAVQGCTKTVSFQTDVLCNACGGSGVPPGTRPETCKRCKGSGVNYVQAGIFRMESTCTTCKGTGKIVSSFCKSCRGAKVIKGTKSVKLDFTPGIDNNETLKVYRSGGADPDGDQPGDLYVIVRVREDPVFRREGSDIHVDAVLSITQAILGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKKKGIKTKNSWSFGDQFVHFNVSIPTNLTQRQRELIEEFAKEEQGEDFKQRAASGSG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2879 430 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Acco01g2879 430 CDD DnaJ_zf 212 272 IPR001305 GO:0031072|GO:0051082
Acco01g2879 430 Pfam DnaJ C terminal domain 188 398 IPR002939 -
Acco01g2879 430 FunFam Chaperone protein dnaJ GFA2, mitochondrial 72 184 - -
Acco01g2879 430 ProSiteProfiles Zinc finger CR-type profile. 199 277 IPR001305 GO:0031072|GO:0051082
Acco01g2879 430 FunFam Chaperone protein dnaJ 1, mitochondrial 319 425 - -
Acco01g2879 430 Gene3D - 319 427 - -
Acco01g2879 430 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 319 IPR008971 GO:0006457|GO:0051082
Acco01g2879 430 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 39 423 - -
Acco01g2879 430 SUPERFAMILY HSP40/DnaJ peptide-binding domain 323 409 IPR008971 GO:0006457|GO:0051082
Acco01g2879 430 Gene3D DnaJ domain 73 184 IPR036869 -
Acco01g2879 430 PRINTS DnaJ domain signature 77 95 IPR001623 -
Acco01g2879 430 PRINTS DnaJ domain signature 95 110 IPR001623 -
Acco01g2879 430 PRINTS DnaJ domain signature 132 151 IPR001623 -
Acco01g2879 430 PRINTS DnaJ domain signature 112 132 IPR001623 -
Acco01g2879 430 SUPERFAMILY Chaperone J-domain 74 176 IPR036869 -
Acco01g2879 430 Gene3D - 185 314 - -
Acco01g2879 430 SMART dnaj_3 74 132 IPR001623 -
Acco01g2879 430 Pfam DnaJ central domain 212 272 IPR001305 GO:0031072|GO:0051082
Acco01g2879 430 CDD DnaJ_C 183 401 - -
Acco01g2879 430 Gene3D - 212 272 - -
Acco01g2879 430 CDD DnaJ 75 129 IPR001623 -
Acco01g2879 430 Pfam DnaJ domain 75 137 IPR001623 -
Acco01g2879 430 FunFam Molecular chaperone DnaJ 204 277 - -
Acco01g2879 430 ProSiteProfiles dnaJ domain profile. 75 140 IPR001623 -
Acco01g2879 430 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 199 274 IPR036410 -
Acco01g2879 430 Hamap Chaperone protein DnaJ [dnaJ]. 72 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2879 Acco-ChrAcco01 46036846 46043082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2879 68 137 C2H2 Transcription Factor Family AT1G74250 40.000 1.44e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2879 01 46036846 46043082 Acco01g2879 01 46036846 46043082 ECH