Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2873 ATGGCTCAGAGAACGGAAAAGGAAGAAACCGATTTTAAGGTCCCTGAAACCATAATCCCCTGCGTTAACAACTGCGGCTTCACCGGTAATCCGGCCACCAATAATATGTGCCAGAAGTGCTTCAACGCCACCACCTCCGCTGCAGCTGCGTCCTCATCGTCGTCGTCGTCTTCTTCTTCCTCTTCCTCTGCTGCCGGAGTTTCAGCGCCTTCTAAATTTGTCGACGACAAGTTTTCTAGATCTACCGCTTCTCGGTCTCCTAAGAGATCCTATCCTTCCGATGACTCCACGCAAGCGACGGATCGGGCGAACACGGACGAGTTGGCGCCGTCTGAAGCTAAGCGCGTGGTGAATCGGTGCTCTGGATGCCGGAGGAAGGTCGGATTGACGGGGTTCCGGTGCCGGTGTGGGGAGTTGTTCTGTGCTGAGCATAGGTACACCGATCGTCATGATTGCAGCTACGACTACAAAGCTGCCGGACGTGAGGCGATCGCGAGGGAGAATCCGGTGGTCAAAGCCGCGAAGATCGTGATCGTTTGA 540 0.55 MAQRTEKEETDFKVPETIIPCVNNCGFTGNPATNNMCQKCFNATTSAAAASSSSSSSSSSSSSAAGVSAPSKFVDDKFSRSTASRSPKRSYPSDDSTQATDRANTDELAPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYTDRHDCSYDYKAAGREAIARENPVVKAAKIVIV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2873 179 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 61 - -
Acco01g2873 179 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Acco01g2873 179 Pfam A20-like zinc finger 19 42 IPR002653 GO:0003677|GO:0008270
Acco01g2873 179 ProSiteProfiles Zinc finger AN1-type profile. 114 160 IPR000058 GO:0008270
Acco01g2873 179 Gene3D - 92 175 IPR035896 -
Acco01g2873 179 Gene3D - 1 66 - -
Acco01g2873 179 SMART AN1_Zf_4 120 157 IPR000058 GO:0008270
Acco01g2873 179 MobiDBLite consensus disorder prediction 50 68 - -
Acco01g2873 179 Pfam AN1-like Zinc finger 120 157 IPR000058 GO:0008270
Acco01g2873 179 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 176 - -
Acco01g2873 179 SUPERFAMILY AN1-like Zinc finger 102 173 IPR035896 -
Acco01g2873 179 MobiDBLite consensus disorder prediction 50 110 - -
Acco01g2873 179 MobiDBLite consensus disorder prediction 84 105 - -
Acco01g2873 179 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 72 - -
Acco01g2873 179 FunFam Zinc finger AN1-type containing 6 93 175 - -
Acco01g2873 179 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2873 Acco-ChrAcco01 46006506 46007045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2873 8 176 C2H2 Transcription Factor Family AT3G52800 38.462 1.74e-33 115