Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2872 ATGCAATCTCATCATCGTATACCCCACTCCTCTTTCTCCTTTTCCCCACGCCACAGTCACAAGATCGGCGGTGAAGTTCCTTCTCTCTCCTTCCCCTACTTCATCGCATCCCTCCTGTCTCCTAAACCCAACGGTGAGAGTGAGATCAGCAAGAGCAAGATCGGTGATGGTAGTGATGATGGAGAGAAGGGTGGAGCCACAGTTCACCGTTCAACGTCTTCTACCTTGAACCGGGGGTGCCATCTACATCCTCGATGTAACCAAATAGTCTTAGGAATTGTGAAAAACTACAGGGGAGGACTTGGTGGTCGAAAAGATTGTGGCAGGTGGCGATGTTGTGAAGAAAACTTTTGGAGAATGAAGGATGATTTGGGTGGACTGGGGCCTCAGATCAGTGAAGCTGTAAAAATGGTGGAGAAGGCGGCCAAGGGAAGAAAGGAGGAGGTGGTAACCAGAGAGTACACTGTCAACCTTCATAAGCGCTTGCATGGATGCACATTCAAAAAGAAGGCTCCAAAGGCAATCAAGGAAATTAGGAAGTTTGCCCAGAAAGCAATGGGAACAAGTGATGTGAGGGTGGATGTAAAGCTTAACAAACTTGTGTGGAGCCAAGGAATTCGAAGTGTCCCAAGAAGAACGCGTGTTCGCATAGCACGTAAAAGAAACGATGAAGATGCAAAGGAGGAGTTTTATTCGTTAGTCACTGTTGCAGATGTGCCTCGAGAAGAATGGAAAGGTTTGGGCACTAAGGTGATTGATGAAGAGGATTGA 771 0.4734 MQSHHRIPHSSFSFSPRHSHKIGGEVPSLSFPYFIASLLSPKPNGESEISKSKIGDGSDDGEKGGATVHRSTSSTLNRGCHLHPRCNQIVLGIVKNYRGGLGGRKDCGRWRCCEENFWRMKDDLGGLGPQISEAVKMVEKAAKGRKEEVVTREYTVNLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTSDVRVDVKLNKLVWSQGIRSVPRRTRVRIARKRNDEDAKEEFYSLVTVADVPREEWKGLGTKVIDEED 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2872 256 Pfam Ribosomal protein L31e 148 227 IPR000054 GO:0003735|GO:0005840|GO:0006412
Acco01g2872 256 PANTHER 60S RIBOSOMAL PROTEIN L31 138 255 IPR000054 GO:0003735|GO:0005840|GO:0006412
Acco01g2872 256 SMART Ribosomal_L31e_2 147 229 IPR000054 GO:0003735|GO:0005840|GO:0006412
Acco01g2872 256 FunFam 60S ribosomal protein L31 143 255 - -
Acco01g2872 256 MobiDBLite consensus disorder prediction 43 77 - -
Acco01g2872 256 SUPERFAMILY Ribosomal protein L31e 148 225 IPR023621 -
Acco01g2872 256 MobiDBLite consensus disorder prediction 52 66 - -
Acco01g2872 256 ProSitePatterns Ribosomal protein L31e signature. 191 205 IPR020052 GO:0003735|GO:0005840|GO:0006412
Acco01g2872 256 Gene3D - 146 256 IPR023621 -
Acco01g2872 256 CDD Ribosomal_L31e 146 229 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2872 Acco-ChrAcco01 45998170 46004182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2872 143 256 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 80.000 3.28e-61 187