Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2864 ATGAGTGCTGTCTATAATAGTCCTTCTCTCAAATACTCAGGAAACTACTCAGAAATGGATCCTAGAAACATCCAACAGCAGCAACAACGTTGTCATCCTCATCATCAGCCGCAGCAGCAGCAGCAAATTTCTGGGCTTTTGAGGTATCGCTCTGCTCCAAGCTCATTGCTGGCAAACCTGGTGGAAAGAGAAGGAGGTTGCAGAGGCTTGGAACATCAACAACAACATGAGAGAAGATGTTATGTTCAATCCCTTGATGCAGAAATGGAAGGCATGTTAGATTCAAACAACGAATGGAGAAATGTGAAGCATGAAGGAGGGGGAGGAGAAAGAGGAGTAGGAGGTTCTGTTTTTTGCAATGAGGCTAATCAGCTGATTTATGATTCTCATGAAGGATTCCAAGAATTTGGAGTAGGTGGGTCATGTTCAAGTGTGATGATGAACACTGTTATGGTTTCTCAGAACTCCACTCAATCCAAAATGGCTTCTGGGAATTGTTCTAATAATCTTCTCCTCAGGCAGAAGACCTCACCTCCTGGGTTTTTCTCCAATTTCTCTCTCGCAAATGCAACCTTCTCATCTGAGCCATCTTCCTCTTGCCCAAGAAGGATGCCACAGATTGCAGAAAATGGAAATGAAACCCTAGAAGAAGGTGCAAGAACCATTGTTGAAACTAGAAGCATGAGAAATGATAATGGAAGACACCACAAAAGTTATATGCCCAGTTTCACAAGTGACTTCTGGGAAAGTTCTTCATTCACTGCTCATAAAACAGCAAGTGACAGTAATGAATTCATGTTTTCTAATTCAGATGCCTCTGAATCTCAGAAAGCAGATCAATTTGGATATCAGAATGTTGGCTTAACTCATCAAATGAGTTTGCCTATTAGTTCATCAACAAAGAAAGATGGCAGAGAGATGATCTTGCATATTCAGGGATCTGTTCCCTGTAAAATTAGAGCCAAAAGAGGCTTTGCTACTCACCCAAGAAGCATTGCAGAGAGGGTAAGAAGAACAAGGATTAGTGAAAGAATAAAGAAGCTGCAAGAGCTTTTCCCAAAATCAGACAAGCAAACAAATACAGCAGATATGTTGGATTTGGCGGTTGATTATATTAAAGACCTGCGAAAACAAGTCAAGATACTAACAGATACAAGGGCAAGGTGCATATGCTTAGGTGTTCAAAAGCAATAG 1194 0.4112 MSAVYNSPSLKYSGNYSEMDPRNIQQQQQRCHPHHQPQQQQQISGLLRYRSAPSSLLANLVEREGGCRGLEHQQQHERRCYVQSLDAEMEGMLDSNNEWRNVKHEGGGGERGVGGSVFCNEANQLIYDSHEGFQEFGVGGSCSSVMMNTVMVSQNSTQSKMASGNCSNNLLLRQKTSPPGFFSNFSLANATFSSEPSSSCPRRMPQIAENGNETLEEGARTIVETRSMRNDNGRHHKSYMPSFTSDFWESSSFTAHKTASDSNEFMFSNSDASESQKADQFGYQNVGLTHQMSLPISSSTKKDGREMILHIQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQELFPKSDKQTNTADMLDLAVDYIKDLRKQVKILTDTRARCICLGVQKQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2864 397 CDD bHLH_AtbHLH_like 330 382 IPR045239 -
Acco01g2864 397 MobiDBLite consensus disorder prediction 1 42 - -
Acco01g2864 397 Pfam Helix-loop-helix DNA-binding domain 331 375 IPR011598 GO:0046983
Acco01g2864 397 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 387 - -
Acco01g2864 397 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 385 IPR036638 GO:0046983
Acco01g2864 397 Gene3D - 327 390 IPR036638 GO:0046983
Acco01g2864 397 SMART finulus 331 381 IPR011598 GO:0046983
Acco01g2864 397 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 325 375 IPR011598 GO:0046983
Acco01g2864 397 FunFam Transcription factor bHLH130 family 326 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2864 Acco-ChrAcco01 45911572 45914058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2864 44 381 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 34.146 1.25e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g2864 HLH 1.2e-09 No_clan