Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2851 ATGTTAATAGTGAAGTTTGTCGTCTTGCCTGTCAGTGCTCTGAGTAATGTGTGGAAAATAAAAGGTTGCTCCTTTTCCTTTGTGCTGTTGTCGTTGAAGTATTGGTTCAAGATGAATGATGGGAGACCAATAGAGTTGCATTACATAAACCCTTGTTTTCCCTATACTGCTACAGAAAGCTTCATGGAGTTCTTCGACGGACCGCCATTGGGCTATGATCACGCTGGACCAATTCCTTATCAGGAGTACTGGTCAATGAACATGAACCCTTACAAGTTTGGAATGTCTGGTCCGGATAGTGCATCTTATTATGGTTCTTACGAAGAAGATAATAGTTTCCCAAGATTGGAGGTCGACAGGGGAGAGTGGGAATATCCTTTAACAACGACCATTGAAGAGCCTACCACAACAGTCTCTCCATCCAGAAGGGACGAAGTGAATGGCATGCAAACCATCCCTGAAGAATCCAGCCCAAATCGTCATGATTCCAGTACTGCTCCGGTTACATGGCAAGACAATATCGATCCAGATAATATGACTTATGAGGAATTGTTGGACTTGGGTGAGGCAGTTGGAACTCAGAGCCGAGGTCTTTCTCAAGAGCTTATTGATTTACTCCCAACGTCGAAGTACAAATTTGGAAGCTTATTTAAAAGAAAAAATTTTGGGAAAAGGTGCGTTATTTGTCAGATGACGTATAGAAGAGGTGACCAACAAATGAAATTACCGTGCAGACATGTTTACCATGGTGAATGCATCACCAAATGGCTTGGCATTAACAAGAAATGCCCAGTTTGCAACGTTGAGGTATTTGGTGCTGAATCAACACACTAG 834 0.4245 MLIVKFVVLPVSALSNVWKIKGCSFSFVLLSLKYWFKMNDGRPIELHYINPCFPYTATESFMEFFDGPPLGYDHAGPIPYQEYWSMNMNPYKFGMSGPDSASYYGSYEEDNSFPRLEVDRGEWEYPLTTTIEEPTTTVSPSRRDEVNGMQTIPEESSPNRHDSSTAPVTWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDLLPTSKYKFGSLFKRKNFGKRCVICQMTYRRGDQQMKLPCRHVYHGECITKWLGINKKCPVCNVEVFGAESTH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2851 277 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 42 272 IPR033276 GO:0004842|GO:0016567|GO:0046621
Acco01g2851 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 271 IPR013083 -
Acco01g2851 277 FunFam E3 ubiquitin ligase BIG BROTHER 188 271 - -
Acco01g2851 277 Pfam Ring finger domain 225 267 IPR001841 -
Acco01g2851 277 ProSiteProfiles Zinc finger RING-type profile. 226 267 IPR001841 -
Acco01g2851 277 SUPERFAMILY RING/U-box 225 271 - -
Acco01g2851 277 SMART ring_2 226 266 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2851 Acco-ChrAcco01 45799928 45803782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2851 40 277 C3H Transcription Factor Family AT3G63530 54.694 1.38e-94 277