Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2838 ATGAAAACGCAAAACCTCACGACACTTGGCTTCAATTACCATTCTTTCTATATGGATTTACAGATCCCATATTCAATCATCTTCTTCACTTTCATCTGCTTCTTTTTTGTCATCCACAAGCTATCTTCTTCAGTGAAACCCATCAAAAACCTACCACCTGGGCCATGGAAATTGCCTCTCATAGGAAATCTGCACCAACTAATTTCTGGCTCGCTACCTCATCGTTCTCTCACAAATCTTGCAAACAAGTACGGGCCCTTCATGCACCTTCAACTTGGTCAGGTTTCTCAGATCATAGTGTCTTCACCTGAATATGCCAAAGAAATAATGAACACGCATGATCTGATCTTTGCAAACAGACCCAGAATTCTTGCCTCTGATATCTTTGCCTACAAAAGCACAGACATCGCGTTTGCCCCATATGGAAACTATTGGAGGCAACTTCGAAAGATTTGTGCTTTAGAGCTTTTCTCAGCAAAGAGGGTTCAATCATTCAGAAGTATTAGGGAAGAGGAGGTGTCAACACTTGTGGGGGACATCTCTGAGCATGAAGGTTCTTTCATCAACCTCAGTAGAAAAATCCTCACACTCACAAATTCCATAGCTGCGAGATCGGCCTTTGGGAAAAAGACAAAGAACGTAGAACATATCTTGAAAATTATGGAGCAAACGACGAGGTTGAGTTCTGGGTTATCGATTTCTGATTTTTATCCTTCGCTAGAATTTGTTAGTTTCATCACTGGGACGAGAGCTCGAATGATGAAGGTGCACAAAGATGGAGATAAGGTGTTTGATGACATCATCAGAGAGCACAAAGAAAAGAAAATAAATAATGTTGAAGAGGTAGAGGAGGATCTAGTTGATGTTCTTCTCAAGATTCAAAAGGGTAATGACTTTGATATCCCCTTATCTCTTGACAACATTAAAGCTGTTATTAAAGACGTTTTCATTGGTGGGACTGAAACAACGGCAAGTGTAACAGATTGGGCGATGTCAGAATTGCTCAAAAACCCAAACGCTATGAAAGAGGCACAAGAAGAGGTAAGGAGAGTCTATCGAGACAAGGGATATGTGGATGAATCAGAACTTCACCAATTAAAATATTTAGGTGCAGTCATCAAAGAAACCCTAAGGCTACATCCACCCGGGGCATTGATTCCAAGAGAGAGCAGTGAGAGGGTTGAAATTAATGGATATATAATACCTCCTAAGACAAATATTATCATTAATATTTGGGCCATTGAAAGAGATCCAAAGAGTTGGATTGATCCAGAGATATTTGAACCGAAGAGGTTTCTTGATACAATGGTTGATTACAACTTCAAAGGTTCAAACTTTGAGTATATCCCATTTAGTTCTGGAAGAAGAATATGTCCTGGGCTCACATTTGCCGTGTCTGTTTTAGAGTTGTTACTTTCTAATTTACTTTACCATTTTGATTGGAAACTAGCAAAGGGGATGAGGCTTGAGGAATTGGACATGGATGAGTCATTTGGTTCCGTGATAAGAAGAAAAAATGATCTCATGTTAGTTCCTATTCGGTATTCCCCTTGA 1554 0.3977 MKTQNLTTLGFNYHSFYMDLQIPYSIIFFTFICFFFVIHKLSSSVKPIKNLPPGPWKLPLIGNLHQLISGSLPHRSLTNLANKYGPFMHLQLGQVSQIIVSSPEYAKEIMNTHDLIFANRPRILASDIFAYKSTDIAFAPYGNYWRQLRKICALELFSAKRVQSFRSIREEEVSTLVGDISEHEGSFINLSRKILTLTNSIAARSAFGKKTKNVEHILKIMEQTTRLSSGLSISDFYPSLEFVSFITGTRARMMKVHKDGDKVFDDIIREHKEKKINNVEEVEEDLVDVLLKIQKGNDFDIPLSLDNIKAVIKDVFIGGTETTASVTDWAMSELLKNPNAMKEAQEEVRRVYRDKGYVDESELHQLKYLGAVIKETLRLHPPGALIPRESSERVEINGYIIPPKTNIIINIWAIERDPKSWIDPEIFEPKRFLDTMVDYNFKGSNFEYIPFSSGRRICPGLTFAVSVLELLLSNLLYHFDWKLAKGMRLEELDMDESFGSVIRRKNDLMLVPIRYSP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2838 517 FunFam Cytochrome P450 99A2 41 513 - -
Acco01g2838 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Acco01g2838 517 PANTHER CYTOCHROME P450 71B11-RELATED 37 513 - -
Acco01g2838 517 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 Pfam Cytochrome P450 52 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 SUPERFAMILY Cytochrome P450 52 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco01g2838 517 CDD CYP71-like 83 508 - -
Acco01g2838 517 Gene3D Cytochrome P450 45 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2838 Acco-ChrAcco01 45516401 45518259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2838 25 515 Cytochrome P450 AT3G26300 41.865 5.35e-133 393