Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2837 ATGGACGCCATCGCTGGGAATGTTGTTCAGGGACTCGCCTCTTTTGCTCATGAAGAGTTCAAATTGCTGCGAAATGCTAAACATGATGTGGAAAGGATGAAGAACACGGTCCTTGCAATTAGAGCTACATTATTGGATGCAGAGGCAAAGGCCAACAATAACAATCAAGTTAGCTTATGGCTTGCCAGACTGAAAGATGTACTCTATGATGCTAATGACCTGCTTGATGATTTGTCCACTGAAGCTTTGAGGAGGCAAATCATGACTCAAAACATGTATAAAGCGGCAAAGAAGGTACGGATCTTCTTCTCGAAATCAAACCAACTTGTTTATAATCTTAAGATGGCTCATAAATTGAGGGAAGCCAGGGGAACGCTAGATGAAATTGAAAAGGACAGGATACCATTTAATTTGACTGATCAGCCTCTTAAGCCTCTCTCTGTACTTGAGGGTAATGTGAAATCTAGTGTTTCTGTTATTCCCATTGTTGGATTTGGAGGGTTAGGGAAGACTACACTTGCTCAATTTGTGTACAATCATGAGGATGTTAAAAAACATTTTGGGTTGAAAAGGTGGGTGTGTGTGTCTGACGAATTTAATGTCAAACAAATAGCTCAAAAGATTTTAGGGGAAGAAGGTCCAAAGGAGATGGAGCAGGTGCAACAAAAGCTTAGAAAATCACTAGAGGGGAAAAAAATTATGATCGTGCTAGACGATGTGTGGAATGATGATGTTGAGTGTTGGCAAGATTTTAAAGGCTTACTAAGTGAGGGAGCAGAGGGGAGCATGATAATTGTTACCACACGTAGTGAGAAGGTGGGAAGGATGATGGGCACCCATCAACCAATTATCCTTAAAGGCTTAGATGGTGAAAGATCATGGGAGTTGTTTTGTAGAATGGCTTTTGTGGAGGGTAGAGAGCCAAATAATGAGTTGATAGCAGTTGGAAGGGAGGTTGTAAATAAATGTGGAGGAGTTCCTCTTGCTATTAGAGTTGTTGGAAGTCTTGTGTATGAGAAAACCTTAGAAGGAATAACAGATTTGTCATACTTGAGAAATTGTGAACTTTGGAATGTACATAAGAAGTTGGAGGAGAGAGTCTTTGCTGTGTTGAAACTCTCTTATGATCATCTTCCTTCACCCCTGAAAAATTGCTTTGCTTTTTGTTCCTTGTTTCCAAAATATTTTTCATTCAAGAAGCAAACACTGACTCAAATGTGGGTGGCTGAAGGATTCATTCAACCAACTGATTCAATGAGGTGTGAGGAATATGTTGGGAATGAATATTTTATGAGTCTGCTTTCAAGATCTTTCTTCCAAGATGTCATAAGAGACCACTATGACAACATAGTGAAGTGCAAAATGCATGACCTCGTTCATGATTTAGCCCTATATGTAGCCAAACATGAGTATCTTGTCATTAGAGATGGAAAAGAAAAGTGCACTCGAGACCCAACAAGGCATTTGTCAATTGACGTGCAAGGAGAGGTTTGGGATGTTCCAACTTCCTTCCTCGAGTTTGAAAAATCAAGAACACTGCTTTTCTACATCAACTCTCTCTTCTCGGTTAGATATCTTGATCTTTCATACAATTTATTCAAGGAGGTCCCAACGGCTGTTACCAGGCTCCACAACTTGCAAACATTAAACCTTTGCAAAACTTATCTTTCGAAATTGCCAAAAGACATTAGTAAATTGGTAAGTTTGAAGCATCTTTATATTACTGGATGTTCAGAATTGGAATGGATGCCAAGAAGTTTGGGACAATTAACTTCACTCCAAACATTGACAAATTTTATAGTAGCTGAACAGGAAATGCATTGGACAGGGGCAAGAAGTGCAAGGATAAATGAATTGGGTAAGCTTAACAACTTGAGAGGCACTTTGACAATAGCTGGGTTGAGTCACCTGAGGTCAAACCATAAAGAAGCTGAGTCTGCAAAGTTAACAGAGAAGCAACATCTTCAACAATTATTGTTGGTTTGGCCGACGCTCACGTTTAATAATTCCACTAAAGTTGTTGCTGAAGATGAATTGATTTTAGAAAGGCTCCATCCTCATCATACCATCAAAGCTCTATGCATTCGCGGATTTTGTGGAGAAAGGTTGCCAGAATGGAAAAGGGATCTCTTGGAGCTACAACATCTTGTGCTCGAGCATTGTGTGTATTTGACATCACTTCCTGAAGGCCTTCATAATCTCACATCATTACGAACATTAACAATACATAATTCCCCATTGTTGGCTGGTGATGAGCAGCAAAAAGTTGCTCATATACCACGCATTGATCCTGATTCCAGGGCTAACCCTGGTTTGCGGGAACTGTACTTTAGCTGGCAGTAG 2343 0.4003 MDAIAGNVVQGLASFAHEEFKLLRNAKHDVERMKNTVLAIRATLLDAEAKANNNNQVSLWLARLKDVLYDANDLLDDLSTEALRRQIMTQNMYKAAKKVRIFFSKSNQLVYNLKMAHKLREARGTLDEIEKDRIPFNLTDQPLKPLSVLEGNVKSSVSVIPIVGFGGLGKTTLAQFVYNHEDVKKHFGLKRWVCVSDEFNVKQIAQKILGEEGPKEMEQVQQKLRKSLEGKKIMIVLDDVWNDDVECWQDFKGLLSEGAEGSMIIVTTRSEKVGRMMGTHQPIILKGLDGERSWELFCRMAFVEGREPNNELIAVGREVVNKCGGVPLAIRVVGSLVYEKTLEGITDLSYLRNCELWNVHKKLEERVFAVLKLSYDHLPSPLKNCFAFCSLFPKYFSFKKQTLTQMWVAEGFIQPTDSMRCEEYVGNEYFMSLLSRSFFQDVIRDHYDNIVKCKMHDLVHDLALYVAKHEYLVIRDGKEKCTRDPTRHLSIDVQGEVWDVPTSFLEFEKSRTLLFYINSLFSVRYLDLSYNLFKEVPTAVTRLHNLQTLNLCKTYLSKLPKDISKLVSLKHLYITGCSELEWMPRSLGQLTSLQTLTNFIVAEQEMHWTGARSARINELGKLNNLRGTLTIAGLSHLRSNHKEAESAKLTEKQHLQQLLLVWPTLTFNNSTKVVAEDELILERLHPHHTIKALCIRGFCGERLPEWKRDLLELQHLVLEHCVYLTSLPEGLHNLTSLRTLTIHNSPLLAGDEQQKVAHIPRIDPDSRANPGLRELYFSWQ 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2837 780 PANTHER DISEASE RESISTANCE PROTEIN RP 45 750 IPR044974 GO:0006952
Acco01g2837 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 389 IPR027417 -
Acco01g2837 780 Pfam Rx N-terminal domain 6 92 IPR041118 -
Acco01g2837 780 Gene3D - 287 374 IPR042197 -
Acco01g2837 780 Pfam NB-ARC domain 157 376 IPR002182 GO:0043531
Acco01g2837 780 FunFam Probable disease resistance protein At1g63360 375 465 - -
Acco01g2837 780 Pfam Leucine rich repeat 523 577 IPR001611 GO:0005515
Acco01g2837 780 Gene3D - 375 465 IPR036388 -
Acco01g2837 780 Gene3D - 140 284 IPR027417 -
Acco01g2837 780 PRINTS Disease resistance protein signature 159 174 - -
Acco01g2837 780 PRINTS Disease resistance protein signature 227 241 - -
Acco01g2837 780 PRINTS Disease resistance protein signature 323 337 - -
Acco01g2837 780 PRINTS Disease resistance protein signature 564 580 - -
Acco01g2837 780 Gene3D - 5 119 - -
Acco01g2837 780 Gene3D Ribonuclease Inhibitor 484 780 IPR032675 -
Acco01g2837 780 SUPERFAMILY L domain-like 439 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2837 Acco-ChrAcco01 45498861 45501406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2837 157 392 WRKY Transcription Factor Family AT5G45050 26.613 4.91e-10 61.6