Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2788 ATGGGTAGAGAAATTTGGTGGGCCCTTTTCCTTCTCTCATTCCTTCTCTCTGTGGATGAAATCCATGGAAGCATGAGGCAAGAACAGGCCCTGAGGAATCTGAACAAGGCCAAGTTCTGGGGAGGTTCCGTTGACAAAAGAAGTGAAACAATCTTGGAGGTTGACGATAAGGCTGTGTTTGGCGACCATGAGTATGATAAGTCTCGTTACTATTATGCTCAACAAGGATTAAAAGAGAAAGATAGGATTCAGAAACTTCCTGGGCAACCTGAAGGTGTCAGTTTTTCTCAGTATGGAGGATATGTCACTGTAGATAAAATTGCAGGAAGAGCTTTCTATTATTACTTTGTTGAAGCTCAACAATCTCAATATCATACCCACAAATTGCCTCTGCTTCTCTGGCTCAATGGAGGTCCAGGATGTTCATCACTTGCGTATGGGGCAATGCAAGAGCTGGGACCATTCCGAGTAAACAGTGATGGCAAAACACTTCAGACCAACAAATACTCATGGAACCATGCTGCAAATGTATTGTTTTTAGAATCACCAGCCGGAGTAGGATTTTCATATTCAAACAAGACATCGGATTATGACAATAATGGTGACAGGAAAACAGCTTCAGACAATTATGTGTTTTTGAGGAATTGGCTGGAGAGATTTGCAGAGTATAAGGATTCAGAATTTTACATAGCAGGGGAAAGCTATGCAGGTCATTATGTGCCTCAGCTTGCTCACACCATTCTCCACCACAACAACCACCCCAATTCCTCCTTCTACATCAACCTCAAAGGCATCCTGATAGGGAATGCAGTGATAAATGACAACACAGACACCAGAGGGATATGGGATTTTTTGGCAAGCCATGCCATAATATCAGACCGAGCAGCTCGTGCTGCGAACAAATTGTGTGATTTCTCAGAGACTGTCTCCAACCAGACCAGTGAATGCAAAGCAGCTACTGCTGAAATTGAGAATGATGTTCGGGACATTAATATTTACAACATCTTTGCTCCTCAGTGCCAAAATACCAACGTCACTTTCCTCCCTAAGCCTCCCTCTGTAGTGACAGACCCATGTAGTGATTTTTATGGATATGCATATTTGAACCGAGCTGATGTACAAGAGGCACTACATGCCAATGTGACAAAACTCACACATGACTGGGAGCCTTGCAGTGCTGTTCTAACTCAATGGGTTGATAGTGCTTCCACTGTGCTTCCCCTCTTACATGAGTTCCTCAATCACAGCCTTCAAGTTTGGATCTTTAGTGGAGATATTGATGGGAGGGTGCCTGTAACTTCATCCAAGTATTCTATTGAGAGGTTGAATCTTCCTGTTACGACTGATTGGCATCCCTGGTTCGTCAACGGAGAGGTAGGAGGGTACACAGAGGTTTATGAAGGAGGCTTAACATTTGCAACAGTGAGAGAAGCAGGGCACCAAGTGCCGAGCTATCAGCCAGCAAGAGCCCTCTCTTTGGTTAGCCACTTCCTACGTGGCATCCCTCTTCCTAATTCCACACATACCCCTCATTTCTAG 1539 0.4425 MGREIWWALFLLSFLLSVDEIHGSMRQEQALRNLNKAKFWGGSVDKRSETILEVDDKAVFGDHEYDKSRYYYAQQGLKEKDRIQKLPGQPEGVSFSQYGGYVTVDKIAGRAFYYYFVEAQQSQYHTHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLQTNKYSWNHAANVLFLESPAGVGFSYSNKTSDYDNNGDRKTASDNYVFLRNWLERFAEYKDSEFYIAGESYAGHYVPQLAHTILHHNNHPNSSFYINLKGILIGNAVINDNTDTRGIWDFLASHAIISDRAARAANKLCDFSETVSNQTSECKAATAEIENDVRDINIYNIFAPQCQNTNVTFLPKPPSVVTDPCSDFYGYAYLNRADVQEALHANVTKLTHDWEPCSAVLTQWVDSASTVLPLLHEFLNHSLQVWIFSGDIDGRVPVTSSKYSIERLNLPVTTDWHPWFVNGEVGGYTEVYEGGLTFATVREAGHQVPSYQPARALSLVSHFLRGIPLPNSTHTPHF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2788 512 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 487 IPR001563 GO:0004185|GO:0006508
Acco01g2788 512 Pfam Serine carboxypeptidase 87 500 IPR001563 GO:0004185|GO:0006508
Acco01g2788 512 FunFam Carboxypeptidase 77 342 - -
Acco01g2788 512 FunFam Carboxypeptidase 405 500 - -
Acco01g2788 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Acco01g2788 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Acco01g2788 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 179 IPR001563 GO:0004185|GO:0006508
Acco01g2788 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 190 IPR001563 GO:0004185|GO:0006508
Acco01g2788 512 SUPERFAMILY alpha/beta-Hydrolases 83 504 IPR029058 -
Acco01g2788 512 Gene3D - 359 395 - -
Acco01g2788 512 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Acco01g2788 512 Gene3D - 405 500 - -
Acco01g2788 512 Gene3D alpha/beta hydrolase 77 342 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2788 Acco-ChrAcco01 45078933 45085663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2788 367 503 Calmodulin-binding Proteins AT2G22960 29.927 1.23e-15 73.6