Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2776 ATGGGTTACTTCTCTTGCAGAGCTGAATCTTCCGTTTCTACCTCCAATTCTGTATCCCCATCTTCCTCCTCTAAACCCTCCTCTGCTCAGAAACCTGACAAACCCATCAAGATCCAACACTTCGACTACAATGACCTTGAAGCCGCCACTAATGGTTTCTCGGACAGAAAGCTCCTAGGCAAAGGCAGCCATGGCTATGTCTACAAAGCCGTTGTTCGAGGCCGTCCCGTGGCCGTCAAGAGGCCGTCGAGAGCACACGCTGCTGTTCTTCGACGACCCAGTTTGTTGTCTTCTTCTTCGTCGGCGCCGGAGATTACCAACGAGGTGGACAACGAGATCGACATCTTGTCGAAAATTCAGAGCCCGGGATTGGTCAATTTGGTGGGTTTCACAAACGATTCGAAAGATAGACTTCTGGTTGTGGAGTTCATGAGCAATGGAACCCTCTACGATGTTCTTCATTCTTCTGCACGACCACCCAATTGGGGTCGGAGAATCCGATTGGCTCTGCAAACTGCAAAGGCCATCGATACCCTTCATTCCTCAACCCCACCTGTAATTCACCGAGACATCAAATCTGCGAATGTTTTAATTGATCGAAACTTCAATGCTCGATTGGGAGATTTTGGGTTAGCCCTGCGAGGCCATGAAGATGATTATAGACTCAGGTCTACTCCTCCTGCAGGTACTATGGGGTATCTTGATCCTTGTTATGTGACTCCAGATAACTTGAGTACAAAAACAGATGTGTTTAGTTTTGGGATTTTGCTGTTAGAGATAATTAGTGGTAGAAAAGCCATTGATATTACATATTCACCACCTTCCATTGTGGATTGGGCCATTCCTCTCATTAAGAAGGGAAAGTTATTGGCTGTTTATGATCCTAAGATATCACCTCCTAAGGATCCAGTTGTTAGGAAGCAATTGGCTGTGATTGCTGCAAAGTGTGTGAGGTCTTGCAGGGAAAGAAGGCCTTCAATGAAGGAGATAGTTGCTTGGCTTACTGGGTTATGTAAACTGGTGCCTCTTCATTCTTGGAATGGTTTTAACAATCCCTGTATGATGATTGAGACTGTGGGGCGCCCAATTGAAGCTAGAAATGCCCATATGAGTCCAAGACAAGAGGAAGGTTTAGAAGGTGGAAATTTTAAAACTTTAGACGCTAGATTGTCTAAATCTGCAAATAGATATTCAAGGAGAGTGTATTCTGATCTGGGGTTCAGAAGCAACTTGATGGAACTTATGACTAACCCTGAGGAACCGGATAAATCTGGTTATAGAGTTTCCAGCTCAAGGTTTGGTAGTGGGAGATATTTCACAAGAAGCTTAAATCTCTACAGGGCATGTGGTACAGATAAAGATGCTTTAGGTTTGAGTGAAGGCCAAATTGTTGGTGATGGGAGCTCAAATTTGTGTCCAAAACAAGAAGGTAATGCTGGATCAGATTTGAATTCTCAGGAAGCTGAAGCTAATTCCTAG 1479 0.4449 MGYFSCRAESSVSTSNSVSPSSSSKPSSAQKPDKPIKIQHFDYNDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRAHAAVLRRPSLLSSSSSAPEITNEVDNEIDILSKIQSPGLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSARPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHEDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPKISPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIVAWLTGLCKLVPLHSWNGFNNPCMMIETVGRPIEARNAHMSPRQEEGLEGGNFKTLDARLSKSANRYSRRVYSDLGFRSNLMELMTNPEEPDKSGYRVSSSRFGSGRYFTRSLNLYRACGTDKDALGLSEGQIVGDGSSNLCPKQEGNAGSDLNSQEAEANS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2776 492 PANTHER OS01G0253100 PROTEIN 20 337 - -
Acco01g2776 492 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
Acco01g2776 492 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Acco01g2776 492 ProSiteProfiles Protein kinase domain profile. 53 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2776 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Acco01g2776 492 MobiDBLite consensus disorder prediction 462 492 - -
Acco01g2776 492 SUPERFAMILY Protein kinase-like (PK-like) 30 334 IPR011009 -
Acco01g2776 492 Gene3D Phosphorylase Kinase; domain 1 24 143 - -
Acco01g2776 492 MobiDBLite consensus disorder prediction 463 492 - -
Acco01g2776 492 FunFam Serine/threonine-protein kinase-like protein 144 347 - -
Acco01g2776 492 MobiDBLite consensus disorder prediction 7 30 - -
Acco01g2776 492 Pfam Protein kinase domain 54 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2776 492 MobiDBLite consensus disorder prediction 1 34 - -
Acco01g2776 492 SMART serkin_6 53 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2776 492 FunFam Serine/threonine-protein kinase-like protein At1g28390 22 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2776 Acco-ChrAcco01 44969433 44970911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2776 5 334 Receptor kinase-like Gene Family AT3G59420 41.349 4.53e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Acco01g2776 Pkinase 7.5e-37 CL0016