Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2765 ATGGGTCAGAAGAGCTGGTTTTCTCTGATAAAGAGGCTTTTTAGATGGGGGACACAATCTGAACGAGGCAAGAAGGAGAAGAGGATGAAGATTAAGAGATTAGATCCAATTGCTGTTCCATCAAAAGAAACCACAATGCTAGGTGGTGAAGAAGATGAAGAACAGAGGAAGCATGCTTTATCAGTGAAAGGAAATTCTGCAGCCATCAGAATCCAAGCTGCATTTAGGGGTTACCTAGCAAGGAAGGCATTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATTATTAGAGGCAGAGCAGTGAGACGCCAAGCTTTGAGGTCCCTCAAGTGTTTGCAGTCAATTGTTAGCATCCAATCACAAGTCTCTGCTTCAAGGAGACTTCAAATGCTTGAAGGCATATCTCTCTATGATCAACCCCAAACCTTCCATGCTTCAAGGGACAAGATAATAAAGATGGATTCAAACAGTGAAAAAAGGTGGGATGACAGCATTTTGCTGAAGGAAGAGGTAGAGACAACATGCATGAGCAAGAAAGAAGCTCTTCTTAGAAGAGAGAGAATAAAACAGTACTCATTTAACCATCGAATGTCTGCAGAAACAGAAAGAAACAAAGTAAATGGGAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACCCAACTTTCTAAAAGCAAAGAGCTTGAAGATTTAGACAGTGCAGCTTTCAGCTCTCATTACAAAGGTGAAGAACATAAGGATAATAATCATGGAGGAAGATCTCTGAAACTGAGAAATCCTCATCAGAAGCAAAACCAGATTGGAGAAGAGTTGAACTGTCACAGCAGGCAGTGTTCTTCAGTGGGAATTAAAGATGACTACTACTCATTCACAAGCTCTCCTGTGATACTACCCACTTACATGGCACCAACTGAATCAGCAAAAGCCAAAGCAAGATCCATAAGCTCCCCAAAATTAAGGGCATGGAGTTATTTGGAGACTGATTCTGATTATAGCTATTCATCACCATGCAAGAAAAAGGCACCTCTTATTGTATCTTCTTCTGTTAACACTACTAGTGAGGTTTTTGGTGGTAGTAATAGGACTGGGAAGTTAAGTGGCAATAATTATAAGCAAATGTCTCCTAGGTTAAAGAGTACAGTTTCAGTGATGAATAAGGCTTGA 1167 0.4079 MGQKSWFSLIKRLFRWGTQSERGKKEKRMKIKRLDPIAVPSKETTMLGGEEDEEQRKHALSVKGNSAAIRIQAAFRGYLARKALRALKGIVKLQAIIRGRAVRRQALRSLKCLQSIVSIQSQVSASRRLQMLEGISLYDQPQTFHASRDKIIKMDSNSEKRWDDSILLKEEVETTCMSKKEALLRRERIKQYSFNHRMSAETERNKVNGRWRYWLEQWVDTQLSKSKELEDLDSAAFSSHYKGEEHKDNNHGGRSLKLRNPHQKQNQIGEELNCHSRQCSSVGIKDDYYSFTSSPVILPTYMAPTESAKAKARSISSPKLRAWSYLETDSDYSYSSPCKKKAPLIVSSSVNTTSEVFGGSNRTGKLSGNNYKQMSPRLKSTVSVMNKA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2765 388 Gene3D - 62 113 - -
Acco01g2765 388 SMART iq_5 63 85 IPR000048 GO:0005515
Acco01g2765 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 108 IPR027417 -
Acco01g2765 388 ProSiteProfiles IQ motif profile. 88 115 IPR000048 GO:0005515
Acco01g2765 388 ProSiteProfiles IQ motif profile. 65 92 IPR000048 GO:0005515
Acco01g2765 388 PANTHER IQ-DOMAIN 5-RELATED 1 338 - -
Acco01g2765 388 Pfam IQ calmodulin-binding motif 66 85 IPR000048 GO:0005515
Acco01g2765 388 Pfam Protein of unknown function (DUF4005) 292 353 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2765 Acco-ChrAcco01 44840580 44843183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2765 3 379 IQD Protein Family AT5G13460 42.389 5.26e-84 261