Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2750 ATGGAGTCTGGCCAGCCTGGCCCAAATGGGAAGTTCATTTACTCCACTAACTCTTTCCTGCTATTCTTAAATACAGGCTCACCGTACCAGTGGCTGATAGAAATGAGACGGGACAACGGAGGCATTAACCTAATCTCTGTTCTTCTTGACTGTGCAAAATGTGTTGCAACTGGAAGCATCAAGAACGCTGACATGGCCCTTGAGTTCATCTCCCGCCTTGCTTCTCCTGATGGTGATGCTGTTCAGAGACTGGTCACTTACTTCAGTAAAGCCTTAGGTTACAGAATCATCAAGAACCTACCAGGTGTCTATAAAGCCCTTCATTCCTCAAAACCCTCACCAACCTCTCAACAAATCTTGGTCCAAAAATACTTCTTTGATCTCTGTCCCTTCCTTAAACTAGCCTACTTGACTACAAACCAAGCCATTGTTGAGGCCATGGAAGGTGAAAAGATTGTTCACATAATTGACCTTCATTCTTCTGATCCTGCTCAGTGGGTTGACCTTATGTTGACTCTCAAGGAACGCCCAGAAGGCTCTCCTCATTTGAAGATCACTGGGATTCATGAGGAAAAAGAGGTTTTGGATCAAATGTTTCTTCATTTGACCACAGAAGCTGGAAAACTTGACTTCCCTTTACAGTTTAATCCAATTGTGAGCAAGTTGGAGGATCTTGATGTTGAAAGCTTGCCAGTGAAATCAGGAGAAGCTCTTGCTATTAGTGCTGTTCTTCAGCTTCATTCTCTTCTTGCAAGTGATGATGATATTAATGTGGCTTCTGCAGCTGCAACTTCAAATGCAAGAAACTCACCAGCCACATCCATGAATCTGCACAGAGCTGTTCATCATAATCATCATCACAGGAGCCAGAGGACTTTTGCAGAGTATTTAGAGAAGGACATGATCAATGCTTATATCTCAAGTCCTGACTCAGCACTATCACCACTTTCTCTCAGTGCATCTCCTAAAATGGATATGTTTCTGAGCTCCCTAAGGAAGCTTCAACCAAAACTTATGGTCATCACTGAGCAAGAATCAAACCTTAATGGGTCTAACTTAATGGAGAGGATAGAGAAGGCACTGTACTTTTATAGTCCATTGTTTGATTGCTTGGACTCAACCGTTTCAAGGAATTCATTGGAGAGACAGAAGCTAGAGAGTGAGTTGCTTGGGGAACAGATAAAGAGGATAATTGCATGTGAGGGTTTTGAGAGGAAGGAAAGATATGAGAAGCTAGAGAAGTGGACTCCAAGAATGGAAACGGCTGGTTTTAGGCGAGTGCCATTGAGTTACTTTGGGATGTTGCAGGCAAAGAGGTTGTTGCAGATCTATGGGTATAAGTATAAGATCAGGGAAGAGAATGGTTGTTTGCTTTTGTGTTGGAGTGATAGGCCACTTTTTTCTGTATCAGCTTGGAGTTTCCGAAGATGA 1431 0.4284 MESGQPGPNGKFIYSTNSFLLFLNTGSPYQWLIEMRRDNGGINLISVLLDCAKCVATGSIKNADMALEFISRLASPDGDAVQRLVTYFSKALGYRIIKNLPGVYKALHSSKPSPTSQQILVQKYFFDLCPFLKLAYLTTNQAIVEAMEGEKIVHIIDLHSSDPAQWVDLMLTLKERPEGSPHLKITGIHEEKEVLDQMFLHLTTEAGKLDFPLQFNPIVSKLEDLDVESLPVKSGEALAISAVLQLHSLLASDDDINVASAAATSNARNSPATSMNLHRAVHHNHHHRSQRTFAEYLEKDMINAYISSPDSALSPLSLSASPKMDMFLSSLRKLQPKLMVITEQESNLNGSNLMERIEKALYFYSPLFDCLDSTVSRNSLERQKLESELLGEQIKRIIACEGFERKERYEKLEKWTPRMETAGFRRVPLSYFGMLQAKRLLQIYGYKYKIREENGCLLLCWSDRPLFSVSAWSFRR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2750 476 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 469 IPR005202 -
Acco01g2750 476 Pfam GRAS domain family 44 472 IPR005202 -
Acco01g2750 476 ProSiteProfiles GRAS family profile. 35 473 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2750 Acco-ChrAcco01 44706143 44708429 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2750 22 476 GRAS Transcription Factor Family AT1G50420 51.634 4.37e-161 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g2750 GRAS 1.2e-120 CL0063