Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2747 ATGTCAAATTATGATCGAGGTATTGGTGTGGATTTACATCAATCAGAAGTGTCAGAAGAGTCGTTCTTAGATTCATCAAGGAACTACCTCAGTGGCCTACAAGGGGAGGACAGGGGCTTATTCCTTGTTCGTCACCTGAAAACCTGCGCTAAGTTCATTGAAAACAGTGAGTTCAGGAATGCAGGCGGTGCACTCAAGGACCTTGCTTGGCTTGCTTCACCTGATGGAGATACAATTCAGAGGCTAACTAGTAAATTCATAATGGCTTTTGGTCACCGGTGTATGAAGCAAATTCGCCATGTTCCTGAAGTCTTTTGTTGTTTGACTAATCCCTGGTCAACTGTGGAACTGGAACACGCTAGAAAGTTGTTCTCTGAGCTTCTCCCATTCTTGAAGGTCGCTTATCAGATCACCAATCAGGCTATTCTTGAAGCCATGGAAAAAGAACCAGTCTTTCATATAATTGATCTCAATGCCACCAATGCAGCTGAATGGATACATCTTCTTCATGCTTTGAAAGAACGAAGCCAAGGAAACCCACTGCCTCATGTGAAGATCACCATGATAAATAATAATAAACATATTTTGCAACTCGTGGGGTCTGAATTGATTCAGGAAGCTAGAAAAATGAACATGCTCGTCCACTTCAATGGCATTGTGAGCAACCTAGAGAATGTTTGCTTTGAGAAATTGCCTCTGACGCCAGGAGAGCCACTTGCTATAAGCTGTGTTCTTATTCTTCATTCTCTTCTTGCGGTTGATGATGATCAAATGAGTCCTGATTCAGAAGCGCTGCAAATTAAGATGAGGAGATTTCTGAATCAGCTTTGGAAACCCCATCCAAGGATCATGATTGTTACGGAACAAGAATCAGATAACAATGGGCCTAGTTTGAGCAATAGGGTTGATAAGGCACTGAACTGGTATGCTCCACTGTTTGATAGCTTGGAAGCTAATGTTCCAAAAGAGAGAGAAATAGAAAGAATAATGGTGGAGAGGATGATTCTAGGGGAGGAGATAAAGAACATTATTGCTTGTGATGGAGCTGATAGGAAAGAGAGGCATGGCGAGTTTTTGAAGACATGGAGTCCATCTCTTGCATTGGCTGAGTTCGTGAGGGTGCCTATGAATTATGAGATAATGTTGGAGTTGAATGCTATTGATCCTAATTATGGGGTTGCTCTTAGAGATGTGGATGTGATAGATGGATGA 1212 0.4208 MSNYDRGIGVDLHQSEVSEESFLDSSRNYLSGLQGEDRGLFLVRHLKTCAKFIENSEFRNAGGALKDLAWLASPDGDTIQRLTSKFIMAFGHRCMKQIRHVPEVFCCLTNPWSTVELEHARKLFSELLPFLKVAYQITNQAILEAMEKEPVFHIIDLNATNAAEWIHLLHALKERSQGNPLPHVKITMINNNKHILQLVGSELIQEARKMNMLVHFNGIVSNLENVCFEKLPLTPGEPLAISCVLILHSLLAVDDDQMSPDSEALQIKMRRFLNQLWKPHPRIMIVTEQESDNNGPSLSNRVDKALNWYAPLFDSLEANVPKEREIERIMVERMILGEEIKNIIACDGADRKERHGEFLKTWSPSLALAEFVRVPMNYEIMLELNAIDPNYGVALRDVDVIDG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2747 403 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 385 IPR005202 -
Acco01g2747 403 Pfam GRAS domain family 42 385 IPR005202 -
Acco01g2747 403 ProSiteProfiles GRAS family profile. 33 403 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2747 Acco-ChrAcco01 44676262 44680822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2747 30 383 GRAS Transcription Factor Family AT1G50420 38.861 2.10e-86 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g2747 GRAS 3.3e-83 CL0063