Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2745 ATGGATCCAGATTCACCAAAGCTGTACCTGGGAGACATGAGAGTGGAGAGCAGGGGCTTATACCTACATCGTCTCCTCGCGACAGGCGCTAGGTACACCGAGATTCGCGACTTTCACAATGCAAGTGCTGCAGTTGAGAACATTGCTAGTGTTGCCCGCCCTGATGGTGATCCAATGCAGAGGGTAGCAACCTACTTAAACAAGGGGCTTGCTTCCAGGTTAGTGAAGAACATTCGCGGTGTGCCTGAAGCCCTTGATCTGTCATATCCCTTGCCATCCTTAATGAAACAGTTTGCAAGAAAGATGTTCTTGGAGTTCTGTCCATTCTTGAAGTTTTCTTATGTCATCACCAATCAGGCTATTGTAGATACCATGAGAGGAGAACAAGGGTTTCATGTTATTGATCTTAATGCCTGTGATGCTACCCAATGGATGTATCTCCTTCATACTTTGAAGGAACAAAACCAAGGAGATCACGAGCTACCTTTTCTGAAGATTACTGGTATTCATGAAAATAACGAGGTTTTGGAACAAACAGGCTTTCAATTGATTCAAGAAGCTCAGAGACTGAAAATTCCCTTCCACTTCTATCCAATTTCAAGCCAGTTGGAGAAACTTTGCTTTGAGAAATTGCCATTGAAGCCAGGGGAACCCCTTGCTATAAGTTCTGTTCTTCACCTTCATTCTCTTCTGGCAGTTGATGATCAAATCAGTCCTGATTCAGTTTTGACACCTAATCCTTCGCAATACGATTCACCGAAGATGAAGAGGTTTCTAAGTTGCCTTTGGAAGCTTCAACCAAGATTGATGGTCATTACAGAACAAGAATCAGACAACAATGGACCTTCTCTGACAGACAGGCTTGACAAGGCACTGAATTTCTATGCTGCATTGTTTGATTGCTTAGAAGCTAATGTCCCGAAAGCGAAAGCAGTAGAGAGAATCATGCTGGAAAATATGCTTCTTGGGGAGGAAATGAAGAACATTATTGGTTGTGATGGAGTTGATAGAAAAGAGAGGCATGGTAAGTTTCTGAAGACGTGGTGCCCATTGCTTGAATTGGCCGGGTTCGTGCGGGTTCATATGGACTACAACAGAATGTTGCAGGTGACGAGGCCATTACAGAGCTATGGGAATGGATACAAGCTGCTAGACTTCAATCAATGTCTGTTTACTTGCTGGAATGATCTCCCACTCTTTTCCATATCAGCCTGGAGGTTCTGA 1224 0.4379 MDPDSPKLYLGDMRVESRGLYLHRLLATGARYTEIRDFHNASAAVENIASVARPDGDPMQRVATYLNKGLASRLVKNIRGVPEALDLSYPLPSLMKQFARKMFLEFCPFLKFSYVITNQAIVDTMRGEQGFHVIDLNACDATQWMYLLHTLKEQNQGDHELPFLKITGIHENNEVLEQTGFQLIQEAQRLKIPFHFYPISSQLEKLCFEKLPLKPGEPLAISSVLHLHSLLAVDDQISPDSVLTPNPSQYDSPKMKRFLSCLWKLQPRLMVITEQESDNNGPSLTDRLDKALNFYAALFDCLEANVPKAKAVERIMLENMLLGEEMKNIIGCDGVDRKERHGKFLKTWCPLLELAGFVRVHMDYNRMLQVTRPLQSYGNGYKLLDFNQCLFTCWNDLPLFSISAWRF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2745 407 ProSiteProfiles GRAS family profile. 13 406 IPR005202 -
Acco01g2745 407 Pfam GRAS domain family 23 406 IPR005202 -
Acco01g2745 407 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 401 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2745 Acco-ChrAcco01 44646050 44647928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2745 5 406 GRAS Transcription Factor Family AT1G50420 41.295 2.57e-110 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g2745 GRAS 4.8e-95 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2745 01 44646050 44647928 Acco01g2745 01 44646050 44647928 ECH