Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2744 ATGGATCCAGGTTCCAGTTCCGGCTCAGACTCACCATACCAATGGCTCACAGAATTGGGATGGGAAGCGAAGGGCATTTTAATTGCCCGTCTACTTCCCCACTGTGCAAAACTTACCGAAACCGGCGACGTCATGAACGTGGTAGCCACCCTCCAGAAAATTGCCACTCTGGCCGCCCCCGACGGCGAGGCCCTTCAGCGAGTGGCCACTTATGCCAACGAAGGCCTCGCTCATCGGATGCTCCACAAGTACATCCCCGGCCTGTCAGAATCACTGAGTCTGACGAACCGCTTGTCGGCGTCGGAGGTGGTGCTTGTCCGGCGGCTGTTCCGAGAGCTGTGTCCCTTCTTGATGTTCTCATACTGGTTATCAAATCACGCCATAGCTGAAGCCATGAGAGGCGAATCGGTGATTCATTTGATCGATTTCAACGCTTCAGATCCAGAACAGTGGATCCATCTTCTTCATACATTGAAGGATCTGTCTCAAGCGGATAATTTGCCTCTTCCGTTTCTGAAAATAACGGGGATTCATGAGAAGAAGGAGGTTCTGGAAAAGACAGGGTTTCACTTGATGGGAGAGGCTGAGAGATTGAGCTTCCCCTTCTTCTTTTATCCATTTGAGTGCAAATTGGAGAATCTCATGTTTGATAAGTTGCCTCTGAAGCCAGATGAACCTCTTGCCATTGTTTCTGTTCTGAAGCTCCATTCTCTTCTCGCTTCTGATGATCAAACCGCTACGAGTAGGATTAATTCTCCTGCAGAGTTGTTTGAGAGACTAAGGATCAGACCTAGTCCTAACTCAACCCTTTCTCCATATCCTTCCCCTAAGATGGAGTGTTTTCTAAATGCAATCTGGAACCTCAAACCCAGGTTGATGCTCATCACTGAGCAAGAATCAAATGCCAACGCGTCTTCCCTCAAGACAAGGCTCGAGAATGCACTAGTCTTCTATGGTGCACTCTTTGATTGCTTAGAGGCCAATGTTCCTAAAGCAAGAGAAGCAGATAGATCAATCATGGAGAGGATGCTTTTGGGTGAAGAAATCAAGAACATCATTGCTTGTGAGGGAATTCAAAGAAAAGAGAGGCATGAGAAAGCTGAGACTTGGGTTAGATGGCTTGAACTAGCTGGGTTTCAGAGAAAACCTTTGGACTATGCTAGGATATTGCAAGTAACAAGGCCATTGCAAAACTATGGAAGAGGTTATAAGCTTGAGGAGCATGATCAATGTTTGTTTGTCTGCTGGAATGGTCGTCCACTCTATTCGATATCTGCGTGGAATTTCTAG 1290 0.4705 MDPGSSSGSDSPYQWLTELGWEAKGILIARLLPHCAKLTETGDVMNVVATLQKIATLAAPDGEALQRVATYANEGLAHRMLHKYIPGLSESLSLTNRLSASEVVLVRRLFRELCPFLMFSYWLSNHAIAEAMRGESVIHLIDFNASDPEQWIHLLHTLKDLSQADNLPLPFLKITGIHEKKEVLEKTGFHLMGEAERLSFPFFFYPFECKLENLMFDKLPLKPDEPLAIVSVLKLHSLLASDDQTATSRINSPAELFERLRIRPSPNSTLSPYPSPKMECFLNAIWNLKPRLMLITEQESNANASSLKTRLENALVFYGALFDCLEANVPKAREADRSIMERMLLGEEIKNIIACEGIQRKERHEKAETWVRWLELAGFQRKPLDYARILQVTRPLQNYGRGYKLEEHDQCLFVCWNGRPLYSISAWNF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2744 429 ProSiteProfiles GRAS family profile. 19 428 IPR005202 -
Acco01g2744 429 Pfam GRAS domain family 30 427 IPR005202 -
Acco01g2744 429 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 423 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2744 Acco-ChrAcco01 44639508 44642480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2744 8 427 GRAS Transcription Factor Family AT1G50420 42.129 1.80e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g2744 GRAS 4.2e-97 CL0063