Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2733 ATGAGAATATCCACTCTCTGTTCCATCATTCCCTTCCTCATTTCCTTCCTATGGTACAGCTCCACTCTGTCCAGTGCCTACTCTGACCTCGATGCTCTGCTCAAGCTCAAGGCTTCCCTCAAGGGACCTAAAGCTTCACCTTCTGCCATGGAGGATTGGAAACCTTCTGTTTCTCCATCTGCTCACTGCAAATTCTCTGGGGTTACTTGCGACGATAGTTCCAAGGTTGTCTCTTTAAATGTCTCGTTCCATCCCCTGTTTGGCTCTATTCCGCCGGAGATCGGCCTTCTGGACCATCTTGTCTCGCTCACCCTTTCACAAGACAACCTCACGGGTGAGCTTCCCAAACAGCTCGCCAACCTTTCTTCCCTGCGAGTCCTCAATGTTTCGCACAACGCCTTGACCGGAAACTTCCCCGGTGAACTCACTCTCAACATGAAGCAGCTTGAGGTTCTGGACGTTTATGATAACAGCTTCAACGGCACTTTACCGGAGGAGGTTGTGAAGTTGAAGAATCTGAAGCAGCTTTGGCTTGCTGGGAACTACTTTTCCGGCGAGATACCTGAGAGTTATTCGGAGTTCGAGAGCTTGGAAATTCTGAGGCTGAATGAGAACAGCCTGAGAGGGGGAATCCCGGCGAGTTTAGCGAAATTGAAGAAGCTCAGGGAATTGTTTTTGGGGTATAGTAATGCGTACCAAGGAGGTATCCCGCCGGAGCTTGGCACGATGAGCACGCTTCAACGGATCGATTTATCAAGCTGTAATCTATCTGGTGAGATTCCACCGAGCTTGGGCAACTTGAAGAACGCGGATTCTCTGTTCCTTCAAATTAACAACCTCACCGGAGAAATCCCACCTGAACTCTCCGGTATGACTAGCCTCATGTCACTAGATTTATCCATCAACAGCCTCACCGGAGAGATACCCTCCAGTTTTTCAGAGTTAACGAACTTAACTTTGATCAATTTGAATGAAAACAAGCTTCGTGGCCCTATTCCATCATTCATCGGAGACCTTCCGAATTTGGAAGTTCTTCAGGTGTGGGACAACAATTTCTCGTACATCTTGCCTCAGAATCTGGGCAGTAACGGGAAATTCAAGATCATCGACGTCACAAGCAATCATTTCACTGGTTTGGTTCCTAAAGATTTGTGTAAAGGAGGCAGGTTGAAGACTTTCATTCTCATGAATAATTCCTTCGACGGTCCAATTCCTGAGCAGCTCGGTGGGTGTAAGTCTTTGGAAAAAGTTCGAATTTCTAATAATTTCCTCAATGGCTCTATCCCTCCTGGGCTTTTCAATCTTCCTTTGGTGACGATGATCGAACTCAGTGACAACTTGTTATCCGGCGAGTTACCGTCGGATATGTCGGGCGATCACATCGGGATTTTGGCGTTTTCCAATAATTTATTCACCGGGAAAATCCCGCAGGCGATCGGGAAGCTCCGGAGCTTGCAGAAACTCTTTCTTGATCTGAATCATTTCGTTGGTGAGATTCCTGAGGAAATGTTCAACTTGCCGATGCTGACGAATGTGAACATAAGCCTCAACAATCTCAGCGGTCCAATTCCTAATTCCCTTACTCACTGCACTTCCTTAAACGCTGTTGATCTCAGCATGAACAATCTTGCCGGTGAAATCCCGAGAGCAATAAATAACACAAGAGATCTTAGCATCCTTAATCTCTCGATGAACCACCTAACAGGTTCAATCCCAGAGGGGATCCGCTACATGGTGAGCCTGACCACACTCGATCTCTCCAACAACAACCTCGAAGGCAGAATCCCCACCGGCGGCCAATTCAGTGTCTTCTCTGGCGAGAGCTTTGCCGGAAACCCCAAACTCTGCTTCCCACAAGACCACTCCTGCAAATCCAACAACAAACAGCCCCTGAAATCCGCCAAAATCATCATCATAACAATCTCCCTCCTAACCACCCTCCTCCTCGTCATAATCACAGTCTACACACTCCGAAAAGGAAAGCAGCACAAATCCCTGAGCCGGAAGCTCACCTTGTTCCGACGTCTGAACTTCAAGGCCGACGACGTTCTCGAATGCCTAAAGGAAGAGAACATAATCGGAAAAGGCGGAGCAGGGATTGTGTACAGAGGGACCACCAGAGACGGTACAGACGTGGCGATCAAGAGACTAGTGGGCCAAAGTCGAAGCGGGAGGAACGATTATGGGTTCAAGGCGGAGATAGAGACGTTAGGGAGGATTAGGCACAGGAACATAGTGAGGCTGTTAGGGTACGTGTCGAACAAGGACACGAACTTGTTGGTTTATGAGTATATGAGCCATGGGAGCTTAGGGGAATGGCTTCATGGAGTGAAGGGAGGGCACTTACAGTGGGAGGCAAGGTACAAGATCGCGGTGGAGGCGGCGAAGGGACTGTGTTATCTTCACCATGATTGCTCGCCGGGGATCATACACAGGGATGTGAAGTCGAATAATATATTGTTGGATGCTGATTTTGAAGCTCATGTTGCTGATTTTGGATTGGCTAAGTTTCGTCTTGATCCTGGTGCTTCTCAGTCCATGTCCTCCATTGCTGGCTCTTATGGCTACATCGCTCCAGAGTACGCATACACACTGAAAGTGGACGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTGCTACTGGAGTTGATAGTGGGGAGGAAACCGGTGGGTGAGTTCGGGGACGGCGTGGACATCGTGGGGTGGGTGAAGAACACCACATCGGAGCTGCCTCCTCCGCCGTCGGCTGCCACCATGGTGATGGCGGTGGTGGACCAGAGGCTGACAGGGTATCCTCTCACCGGCGTCATTCACATGTTCAAGATAGCGATGATGTGTGTGGAAGAGAACGGCAGCTGCAGGCCCACCATGAGAGAAGTCGTTCATATGCTCACCAATATTAATCCTCCTCCTCAAGATCTCATCACTCTCTAA 2934 0.4915 MRISTLCSIIPFLISFLWYSSTLSSAYSDLDALLKLKASLKGPKASPSAMEDWKPSVSPSAHCKFSGVTCDDSSKVVSLNVSFHPLFGSIPPEIGLLDHLVSLTLSQDNLTGELPKQLANLSSLRVLNVSHNALTGNFPGELTLNMKQLEVLDVYDNSFNGTLPEEVVKLKNLKQLWLAGNYFSGEIPESYSEFESLEILRLNENSLRGGIPASLAKLKKLRELFLGYSNAYQGGIPPELGTMSTLQRIDLSSCNLSGEIPPSLGNLKNADSLFLQINNLTGEIPPELSGMTSLMSLDLSINSLTGEIPSSFSELTNLTLINLNENKLRGPIPSFIGDLPNLEVLQVWDNNFSYILPQNLGSNGKFKIIDVTSNHFTGLVPKDLCKGGRLKTFILMNNSFDGPIPEQLGGCKSLEKVRISNNFLNGSIPPGLFNLPLVTMIELSDNLLSGELPSDMSGDHIGILAFSNNLFTGKIPQAIGKLRSLQKLFLDLNHFVGEIPEEMFNLPMLTNVNISLNNLSGPIPNSLTHCTSLNAVDLSMNNLAGEIPRAINNTRDLSILNLSMNHLTGSIPEGIRYMVSLTTLDLSNNNLEGRIPTGGQFSVFSGESFAGNPKLCFPQDHSCKSNNKQPLKSAKIIIITISLLTTLLLVIITVYTLRKGKQHKSLSRKLTLFRRLNFKADDVLECLKEENIIGKGGAGIVYRGTTRDGTDVAIKRLVGQSRSGRNDYGFKAEIETLGRIRHRNIVRLLGYVSNKDTNLLVYEYMSHGSLGEWLHGVKGGHLQWEARYKIAVEAAKGLCYLHHDCSPGIIHRDVKSNNILLDADFEAHVADFGLAKFRLDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVKNTTSELPPPPSAATMVMAVVDQRLTGYPLTGVIHMFKIAMMCVEENGSCRPTMREVVHMLTNINPPPQDLITL 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2733 977 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Acco01g2733 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Acco01g2733 977 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 234 335 - -
Acco01g2733 977 SUPERFAMILY Protein kinase-like (PK-like) 682 965 IPR011009 -
Acco01g2733 977 Gene3D Ribonuclease Inhibitor 286 366 IPR032675 -
Acco01g2733 977 SMART serkin_6 687 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2733 977 ProSiteProfiles Protein kinase domain profile. 687 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2733 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 145 233 - -
Acco01g2733 977 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 629 - -
Acco01g2733 977 Gene3D Ribonuclease Inhibitor 190 285 IPR032675 -
Acco01g2733 977 Gene3D Ribonuclease Inhibitor 26 189 IPR032675 -
Acco01g2733 977 SUPERFAMILY RNI-like 235 597 - -
Acco01g2733 977 Gene3D Ribonuclease Inhibitor 367 627 IPR032675 -
Acco01g2733 977 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 975 - -
Acco01g2733 977 SUPERFAMILY L domain-like 28 268 - -
Acco01g2733 977 FunFam Leucine-rich repeat receptor-like kinase 28 144 - -
Acco01g2733 977 Pfam Protein tyrosine and serine/threonine kinase 688 964 IPR001245 GO:0004672|GO:0006468
Acco01g2733 977 Gene3D Phosphorylase Kinase; domain 1 655 764 - -
Acco01g2733 977 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 239 966 - -
Acco01g2733 977 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
Acco01g2733 977 Pfam Leucine Rich Repeat 580 596 IPR001611 GO:0005515
Acco01g2733 977 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515
Acco01g2733 977 SMART LRR_typ_2 578 601 IPR003591 -
Acco01g2733 977 SMART LRR_typ_2 291 315 IPR003591 -
Acco01g2733 977 SMART LRR_typ_2 482 506 IPR003591 -
Acco01g2733 977 SMART LRR_typ_2 146 170 IPR003591 -
Acco01g2733 977 SMART LRR_typ_2 243 267 IPR003591 -
Acco01g2733 977 SMART LRR_typ_2 121 145 IPR003591 -
Acco01g2733 977 SMART LRR_typ_2 339 363 IPR003591 -
Acco01g2733 977 Pfam Leucine rich repeat 293 351 IPR001611 GO:0005515
Acco01g2733 977 Gene3D Transferase(Phosphotransferase) domain 1 765 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2733 Acco-ChrAcco01 44551281 44554506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2733 26 977 Receptor kinase-like Gene Family AT1G75820 62.955 0.0 1215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco01g2733 PK_Tyr_Ser-Thr 6.5e-43 CL0016