Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2702 ATGGCTGCACGGACACAGTTCCATGTTTTGGTTGTTGATGATAGTCTGATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCCTATCATGTAACAGCTGTGGAATCTGGTAGAAAGGCTTTGAAGTTTCTGGGTTTGCAAGAAGATGATGAAATGAAAATAGAAACTGCCATTGTTGCTGCAGAAACCCATCAGGATGTGGAGGTAAATTTGATCATCACAGATTACTGTATGCCAGAAATGACAGGTTATGATCTCACCAGAAAAATCAAGGAATCTAAATCTCTTAGAGATATACCTGTGGTGATTATGTCCTCAGAGAATGTGCCATCAAGGATCAGCAGATGCTTAGAAGAAGGAGCTGAGGAATTCTTTCTGAAACCAGTTCAGCAATCAGATGTAAACAGGCTCAAGCCTCATTTGCTGAGATCTAAAGTTAAGGAAGAAGAAGAGCAACTCATTAATAATGAGAGAAAAGACATGGAAGAGAGCCATTCTCAAGATAAATTTAGACCAAATATATAG 531 0.3898 MAARTQFHVLVVDDSLIDRMLIERLLKTSSYHVTAVESGRKALKFLGLQEDDEMKIETAIVAAETHQDVEVNLIITDYCMPEMTGYDLTRKIKESKSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVQQSDVNRLKPHLLRSKVKEEEEQLINNERKDMEESHSQDKFRPNI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2702 176 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 159 IPR045279 GO:0009736
Acco01g2702 176 CDD REC_typeA_ARR 9 139 - -
Acco01g2702 176 Coils Coil 149 169 - -
Acco01g2702 176 SMART REC_2 7 143 IPR001789 GO:0000160
Acco01g2702 176 Pfam Response regulator receiver domain 9 136 IPR001789 GO:0000160
Acco01g2702 176 MobiDBLite consensus disorder prediction 157 176 - -
Acco01g2702 176 ProSiteProfiles Response regulatory domain profile. 8 144 IPR001789 GO:0000160
Acco01g2702 176 SUPERFAMILY CheY-like 6 156 IPR011006 -
Acco01g2702 176 Gene3D - 8 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2702 Acco-ChrAcco01 44322182 44323422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2702 1 174 Response Regulator Gene Family AT3G57040 51.570 3.63e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco01g2702 Response_reg 4.3e-20 CL0304