Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2677 ATGGAAGCTAAGCGTCGAACGGTTCGCTCCTTTGTCAGCAAACTGAGCTCTGTTTCAGAGCAAACCCAGCTCGAAGCTCTGCGCGAGATACGCTTAATGACCAAACAAGACGAAGAAACCCGACCCGTCATCGCTGATTTGGGTGCGATTCCGTACTTGGTCGATACCCTTTATTCGTATTCGCACGCTTGCCAAGAGAACGCCTCTGCGACGCTTCTCAACATTTCGATTTCCTGTAAAGAGCCTCTCATGTCCACGCGCGGAGTCCTCGACGCGATCTCGCATGTGCTTTCCCGCCATAACTCGACCTCGGCCGCTTCCGCCGTCCAATCCTGCGCCGCCACGTTGTACAGCCTGCTCGTCGTCGATAACTACCGTCCTATCATTGGTTCCAAGCGTGACATTGTGTACGCTCTCGTTGATATCATCAAAAACCCTAAATCGCCAACTAGATCCATCAAAGACGCTCTCAAGGCTCTGTTCGGAGTCGCGCTTCACCCGCTTAACCGGTGCGCGATGATCCAACTCGGCGCTGTTGAAGCTCTGTTCACGGTGCTTCTCGAGGATCGGAAGGTCGGGATTGTGGAGGATGTTACGGCGGTGATAGCGCAAATCGCCGGCTGCGAAGAGAGTGTGGAGGCGTTTCGGAAGGTGTCAGGGATCGGAGTGCTGGTTGATCTTCTGGATATGGGGAATAAGTCGAGCATGAAGACGAAGGAGAATGCCGTTTCTGGATTACTGAAGCTAGTGAGATGTGGAGGAGAGAAAGTGGCCATGGATGTGAGGTTGAGAGCTTTAGGGGCATTTGATGGAATTGCGGACGTGAAACAGAATGGTAGCTCCAAAGGGAAGAGCAAGGCGGAGGTGTTAACGGCGGAATTGACCGGAGATGGTAACCATTGGAATAATAATACACAGAGGCATTCGCGGTTTAATTCATCAACGAGTCAAGATTCATCGTTTTCATTCAATTTATCAACAGATTCATCAGAATCTTGTGTGTAG 1005 0.5114 MEAKRRTVRSFVSKLSSVSEQTQLEALREIRLMTKQDEETRPVIADLGAIPYLVDTLYSYSHACQENASATLLNISISCKEPLMSTRGVLDAISHVLSRHNSTSAASAVQSCAATLYSLLVVDNYRPIIGSKRDIVYALVDIIKNPKSPTRSIKDALKALFGVALHPLNRCAMIQLGAVEALFTVLLEDRKVGIVEDVTAVIAQIAGCEESVEAFRKVSGIGVLVDLLDMGNKSSMKTKENAVSGLLKLVRCGGEKVAMDVRLRALGAFDGIADVKQNGSSKGKSKAEVLTAELTGDGNHWNNNTQRHSRFNSSTSQDSSFSFNLSTDSSESCV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2677 334 MobiDBLite consensus disorder prediction 296 334 - -
Acco01g2677 334 SUPERFAMILY ARM repeat 7 274 IPR016024 -
Acco01g2677 334 MobiDBLite consensus disorder prediction 295 334 - -
Acco01g2677 334 FunFam ARM repeat superfamily protein 2 299 - -
Acco01g2677 334 Pfam Armadillo/beta-catenin-like repeat 39 76 IPR000225 GO:0005515
Acco01g2677 334 SMART arm_5 166 207 IPR000225 GO:0005515
Acco01g2677 334 SMART arm_5 37 77 IPR000225 GO:0005515
Acco01g2677 334 SMART arm_5 208 251 IPR000225 GO:0005515
Acco01g2677 334 Gene3D - 1 294 IPR011989 -
Acco01g2677 334 PANTHER U BOX DOMAIN-CONTAINING 7 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2677 Acco-ChrAcco01 43911588 43912592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2677 8 290 U-box Gene Family AT2G23140 34.507 3.65e-35 133