Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2675 ATGGAAGACAAACATCCTCAACATCATGACCCTCCTCCTCCCTCGGCTCTCCCTAGCAATCATCACGATCATATCGATCCCATCAAAGAAGAATCCCCCAGAAAACCCGTGGCCACCGCCGGCGGAGATAGGTTGAAGAGAGATGAGTGGAGTGAAGGTGCTGTGTCGACGCTTTTGGAGGCTTACGAATCCAAATGGGTGCTCCGTAACAGAGCCAAGCTCAAGGGCCATGACTGGGAGGACGTCGCCAGGTACGTGTCCTCACGCGCCAACTGTACCAAGTCTGCTAAGACCCAGACTCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGGTACCGTTCTGAATCGGCCTCGGGGGATGCGTCTTCGTCTTGGCCGTTGTATTCTCGTCTTGATCTTCTCCTGCGCGGGACTGGGCCTACTCCGTCCACCACGACGCTCGCCGTGCCACTTGCGGCGGCCCCAGCGGTACCGGCACCGTCTCAGTCTACACATCACGGAAATAACCAGGGTTTTGTGTTATTGGAGCCTCCGTTAGCGGTGGCTCAGCTTCATCATCAACCACAGCCGCCTCTGGTTGCCGCCGGTTCTCCTCCTCCGCTTCCCAACGCTCAAAACTCTCATGGGTCCAACGGTATTGACAGGTTAGCCAAGGAAGATGGATTAGGAACAAACAAGTCATCAGAGCAAGTGTCCAACAAGAACGTGAATGAAATTGTGGACACAGATAGCAGCACACCAGCACTGTATAGCCATTCAAAGGAGCACCCAACAAGAAGCAACAACAATAGCAACAAGAAGAGGAAGATGAAGATGGATCATCGAAGCAACACGAAGAAGATGAAGAGAAAGAGTGAAGAAGGGAAGATTAATGAGATGGGAATAGCAGAGAGCATAAGGTGGCTTGCAGAGGTGGTGGTGAGATCAGAGCAAGCGAGGATGGAGATGATGAAGGAGATCGAGAAGATGAGGGTTGAGGCAGAGGCCAAGAGAGGGGAAATGGATCTCAAAAGAACTGAGATAATTGCCAATACCCAGCTAGAAATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGTAGGAGTTAA 1116 0.509 MEDKHPQHHDPPPPSALPSNHHDHIDPIKEESPRKPVATAGGDRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARYVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTPSTTTLAVPLAAAPAVPAPSQSTHHGNNQGFVLLEPPLAVAQLHHQPQPPLVAAGSPPPLPNAQNSHGSNGIDRLAKEDGLGTNKSSEQVSNKNVNEIVDTDSSTPALYSHSKEHPTRSNNNSNKKRKMKMDHRSNTKKMKRKSEEGKINEMGIAESIRWLAEVVVRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2675 371 Coils Coil 314 334 - -
Acco01g2675 371 MobiDBLite consensus disorder prediction 264 279 - -
Acco01g2675 371 FunFam Trihelix transcription factor ASIL2 50 115 - -
Acco01g2675 371 MobiDBLite consensus disorder prediction 224 259 - -
Acco01g2675 371 MobiDBLite consensus disorder prediction 22 50 - -
Acco01g2675 371 MobiDBLite consensus disorder prediction 1 50 - -
Acco01g2675 371 Pfam Myb/SANT-like DNA-binding domain 47 134 IPR044822 -
Acco01g2675 371 Gene3D - 50 115 - -
Acco01g2675 371 MobiDBLite consensus disorder prediction 190 288 - -
Acco01g2675 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 21 357 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2675 Acco-ChrAcco01 43899160 43901918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2675 39 159 Trihelix Transcription Factor Family AT3G14180 36.000 9.52e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco01g2675 Myb_DNA-bind_4 1.2e-19 CL0123