Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2669 ATGTCAATGCATGACGCGGATTTGGCCACTTCAAAATGTTCAAAGTCCAAGCGCCAAGTTCATGCGGCTACCCACCAAGGAATAACTACGAAAAAAAAGTTAAGGAGGGAGGATATGAAAGTTCCTTGTTGTTCGGTTTGCCAAACACGGTACAACGAGGAGGAGAGAGTCCCTCTTCTGCTCCAATGCGGGCATGGGTTTTGCAGAGAATGTTTATCGAGAATGTTCTCGGCGTCCCTCGATACGACGTTGCCTTGTCCCAAGTGTCGCCATGTGTCTAATGTCGGGAACTCTGTTCAATCACTTCGCAAGAATTACGCCGTTCTCGCGCTTATCCACTCAGCTTCGAATGCGACCCGGTCGAATTTCGACGAAGACTTCACTGACGATGAAGAAGACGGTGACAATGACGATGAAACTACCATATTCAGTCGTCGTGGTTCCCAGACGTCGAGCTCAGGTAGGTGTGGACCTGTGATCGAGGTTGGGGTTCACCGGGAGTTAAACTTTCTACGGCGGATAGGCGAGGGGAGGCGGGCCGGAGTGGAAACGTGGACGGCGGTGCTCAGTGGAGGCGGCAGAAGTGGTCAGTGCAGGCACTATGTAGCGGTGAAGAAGGTAGGGATAACAGAGGAGATGAATTTGAATTGGGTGCGTGAACAGCTTGAGAATTTGCGCCGTACATCGATGTGGTGTAGAAATGTGTGCACGTTTCATGGGGTTATGGAGGTAGACAAGAGTTTGTGTCTTGTGATGAACCGGGGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAATGAGGGGAGACTCACTTTGGAGCAAGTCCTAAGGTATGGGGCTGACATTGCACGAGGTGTGGTTGAGCTTCATGCTGCAGGTATTGTTTGCATGAATCTAAAGCCATCCAATCTTCTTCTTGATGAAAATGGTCATGCAGTGGTTTCTGATTACGGACTTGCTGGAATTCTGAAGAAGCCTTCCTGTTGGAAGGCCCAATCAGACTGTGACCCATCAAGGATCCATTCTTGTATGGAATGTATGATGCTCAGCCCACATTACTCAGCTCCAGAGGTTTGGGAGCCTTTGAAGAGGTCAAATTTATTCAGGGCTGATTCAATAGGTGTATCCAAAGAATCAGATGCTTGGAGTTTTGGTTGTACTTTGGTGAAAATGTGCACAGGTTTTGTTCCTTGGGCTGGTCTAAGTGCGGAGCAAATTCATCAAGCCATTGTCAAGGGACGGAAGTTGCCTCCACAGTATGCTTGTATTGTTGGCAGTGGAATACCTAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAGTGCAATGTTAGCTACATTTCTCCATCATTTGCAGGAAATACCATACAGTCCTGCTGCAAGCCCTGATAAGGATTCTGTTGAATGCTCTGTGTCAACTGTGCTAGAAGCTTCCCCTCAAACACTTGAATTGAAAATTCCTCAAGATTATGCAAACCATCTTCATCGGCTTGTATCTGAAGGGAATGTTCGGGGTGTTAGACATCTCCTTGCAAAGGCTGTGTCAGTAAATGGTAGCAACTACATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGGCAGACTGCACTCCACTTGGCTTGTAGGCGTGGCAGTGCAGAACTTGTTGAGGCTATTTTGGCATGCAAAGAGGCAGATGTTGATGTCTTGGACAAAGATGGAGTTCCTCCACTTGCTTTTGCTTTAGCAGCTGGATCTCCAGAATGTGTTCGTAGTCTTATCAAAGGAAATGCTAATGTGAGGTCTGGATTAGGAGATGGCTTTGGCCCATCTATTGCTCACATTTGTGTCTATCATGGCCAACCAGAGTGCATGCGAGAACTATTATTGGCTGGAGCTGATCCAAATGCAGTTGACGACCAAGGTGAATCTATATTGCATTGTGCAGTAGCCAAGAAGTATACAGATTGTGCTCTAGTGATACTAGAAAATGGGGGCTGCAGATCAATGGGGATCATAAATCCAAAGAATACGACACCATTGCACCTGTGTGTGGAAACATGGAATGTGGCTGTTGTCAAAAAATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAACCCCATTGGCACTGCATTGTGCATGGCAGCTGCATCTAAGAAAGATCATGCAATTGAGGGGAGGGAACTGGTTCGAATATTGCTTGCTGCAGGTGCTGACCCATCTGCTCAAGATTCACAGTATGGGTGTACAGCTTTGCATATGTCTGTCAAATCTAATGATGTTGAGCTGGTTAAGGTTATCCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGAGCAAAATAGTACGCCTCTTCACTTGGCTTTAACTTGTGGAACAAAGTCATGTGTTAAATTGCTTCTATCTGCTGGGGCGAATTATAATTTGCAGGATGATGATGGTGACAATGCTTTGCACAAAGCAGCAAAGGCAGCAAAATCAGCTCGTGAAAACCTTGACTGGCTCATTGTTATGCTTAGAAATCCTGATGCTGATGTTCACGTCAGAAACCACAGTGGAAGGACGCTGCGTGACATATTGCAGGCCCTTCCCCGGGAATGGATATCTGAGGATCTGATGGAAGCACTCATGTATAGAGGAGTTCATCTGACTCCTACAATGTTTGAAGTGGGAGATTGGGTGAAGTTCAAAAGAACCGTCACAACTCCAACTTATGGATGGCAATGTGCTAGCTCAAGGAGCGTTGGCTTTGTGCAAAATGTTCCAAGCAGAGACAATCTCGTTGTTTCATTTTGTTCTGGAGAGGCCCATGTTTTAGCAAATGAAGTTGTGAAAGTCATTCCATTAGACAGGGGTCAACATGTACAGCTTAAATCAGAAGTTAAAGAACCCAGGTTTGGTTGGCGTGAACAATCACGTGACAGAATAGGCACAGTATTGTGCATTGATGATGATGGAATCCTACGTGTTGGGTTTCCCGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGCAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTCCGCATTCGCCCAACTCTTACATCTACCAAGCATGGGTTAGGATCTGTGACACCAGGAAGCATTGGTATTGTATCTTCTATCAGGCCAGACAGTAGCCTGCTGATAGAATTGAGCTATCTTCCAACTCCATGGCATTGTGAACCAGAAGAGGTTGAGCATGTTGATCCCTTCAGGGTAGGAGATCGGGTATGTGTGAAGCGATCTGTTGCAGAGCCCAGGTGTGCTTGGGGAGGTGAGACTCATCATAGTGTTGGAAGAATCAGTGAGATTGAGAATGATGGTCTCTTAATAATTGATATACCAAACCGACCAATACCATGGCAAGCTGATCCATCTGATATGGAGAAGCTGGAAGATTTTAAGGTGGTTGGAGATTGGGTCAAAATAAAATCTTCAGTGCCTTCCCCAAGATATGGATGGGATGATGTTAGTAGGAATAATATTGGGGTAATCCATAGCTTGGAGGAAGACGGTGATATGGGTATAGCTTTCTGTTTCAGAAGTAAACCTTTTTGTTGCTCTGTCACTGATGTGGAGAAAGTGCCACCTTTAGAGGCAGGGCAAGAAATTCATGTGATGCCATCTGTTACCCAGCCTCGACTTGGATGGTCAAATGAATCTCCAGCTACTGTTGGAAAAATAGTGACAATTGACATGGATGGTGCTCTCAATGTGAGAGTCACAGGCAGGCAGAGCTTGTGGAAAGTTTCTCCAGGAGATGTAGAACAACTTTCAGGATTTGAAGTTGGTGATTGGGTACGTTCAAAACCAAGCATAGGAACCAGACCAAGTTATGATTGGAATGGTGCTGTGAAGGATGGTATAGCTGTTGTACACAGTGTGCAGGATTCTGGATACTTGGAATTGGCTTGCTGTTTTCGTAAACAGAGGTACTTGGCTCATTATACAGATATTGAAAAGGTTCCGTGCTTTAAAGTAGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGTGCTCAGGCTAAATCTCGAGGCGTTATAACCAGCATTCATGCTGATGGAGAAGTAAGGGTATTATTTTCTGGTTTGCCGGGTTTATGGAGAGGAGATCCTGCTGACCTTGACATTGAGCTGATGTTTGAATTGGGGAAGTGGGTAAGGTTGAAAGATAATGCAAACAATTGGAAATCGATTGTCCCGGGCAGCATTGGTATAGTACAAGGAATAGGATTTAATGGTGATGAATGGGACGGAAGCACTTGTGTTGGCTTTTGCGGGGAGCAAGGAAGTTGGGTCGGACCAACTTCCCATCTTGAAAGAGTTGACAAACTGTCTGTTGGGCAGAAGGTTAGAGTTAAGCAAACAGTAAAGAATCCAAGATTCGGTTGGGCAGGGCACACCCATGCTGATGTTGTAACCATATCAGCAATTGATGCCGATGGAAGGCTTCGAATATACACTCCACCAGGATCAAAAGCATGGATGTTGGACCCATCAGAAGTTGAATTAGTGGAAGAGGAGGAGATACAAATCGGAGACTGGGTGAAGGTCAGAGCATCAGTTTCAACCCCAACCCACCAATGGGGAGAAGTGGGTCACTCGAGCATCGGGGTGGTATATCGAATGGAAGGTGAGGATCTGTGGGTGTCATTCTGTTTCATAGAGAGGCTATGGCTTTGTAAGGCATGGGAAATGGAAAGGGTTAGGCCATTCAAAATTGGGGACAAGGTAAGGATCAGAGAAGGACTTGTGCATCCAAGGTGGGGATGGGGAATGGAGACACATGCTAGCAAGGGAGAGGTGGTAGGGGTAGACGCTAACGGGAAACTAAGGATAAAATTCAGGTGGAGGGAAGGGAAACCTTGGGTGGGAGACCCTGCTGATATTGTTCTTGATGACAAGTGA 4971 0.4605 MSMHDADLATSKCSKSKRQVHAATHQGITTKKKLRREDMKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASLDTTLPCPKCRHVSNVGNSVQSLRKNYAVLALIHSASNATRSNFDEDFTDDEEDGDNDDETTIFSRRGSQTSSSGRCGPVIEVGVHRELNFLRRIGEGRRAGVETWTAVLSGGGRSGQCRHYVAVKKVGITEEMNLNWVREQLENLRRTSMWCRNVCTFHGVMEVDKSLCLVMNRGYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGIVCMNLKPSNLLLDENGHAVVSDYGLAGILKKPSCWKAQSDCDPSRIHSCMECMMLSPHYSAPEVWEPLKRSNLFRADSIGVSKESDAWSFGCTLVKMCTGFVPWAGLSAEQIHQAIVKGRKLPPQYACIVGSGIPRELWKMIGECLQFKPSKRPSFSAMLATFLHHLQEIPYSPAASPDKDSVECSVSTVLEASPQTLELKIPQDYANHLHRLVSEGNVRGVRHLLAKAVSVNGSNYISSLLEAQNADGQTALHLACRRGSAELVEAILACKEADVDVLDKDGVPPLAFALAAGSPECVRSLIKGNANVRSGLGDGFGPSIAHICVYHGQPECMRELLLAGADPNAVDDQGESILHCAVAKKYTDCALVILENGGCRSMGIINPKNTTPLHLCVETWNVAVVKKWVEVATSDEIAEAIDIPNPIGTALCMAAASKKDHAIEGRELVRILLAAGADPSAQDSQYGCTALHMSVKSNDVELVKVILAAGVDVNIRNEQNSTPLHLALTCGTKSCVKLLLSAGANYNLQDDDGDNALHKAAKAAKSARENLDWLIVMLRNPDADVHVRNHSGRTLRDILQALPREWISEDLMEALMYRGVHLTPTMFEVGDWVKFKRTVTTPTYGWQCASSRSVGFVQNVPSRDNLVVSFCSGEAHVLANEVVKVIPLDRGQHVQLKSEVKEPRFGWREQSRDRIGTVLCIDDDGILRVGFPGASRGWKADPAEMQRVEEFKVGDWVRIRPTLTSTKHGLGSVTPGSIGIVSSIRPDSSLLIELSYLPTPWHCEPEEVEHVDPFRVGDRVCVKRSVAEPRCAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKLEDFKVVGDWVKIKSSVPSPRYGWDDVSRNNIGVIHSLEEDGDMGIAFCFRSKPFCCSVTDVEKVPPLEAGQEIHVMPSVTQPRLGWSNESPATVGKIVTIDMDGALNVRVTGRQSLWKVSPGDVEQLSGFEVGDWVRSKPSIGTRPSYDWNGAVKDGIAVVHSVQDSGYLELACCFRKQRYLAHYTDIEKVPCFKVGQYVRFRTGLVEPRWGWRGAQAKSRGVITSIHADGEVRVLFSGLPGLWRGDPADLDIELMFELGKWVRLKDNANNWKSIVPGSIGIVQGIGFNGDEWDGSTCVGFCGEQGSWVGPTSHLERVDKLSVGQKVRVKQTVKNPRFGWAGHTHADVVTISAIDADGRLRIYTPPGSKAWMLDPSEVELVEEEEIQIGDWVKVRASVSTPTHQWGEVGHSSIGVVYRMEGEDLWVSFCFIERLWLCKAWEMERVRPFKIGDKVRIREGLVHPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGKPWVGDPADIVLDDK 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2669 1656 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 124 IPR013083 -
Acco01g2669 1656 ProSiteProfiles Ankyrin repeat region circular profile. 790 822 - -
Acco01g2669 1656 FunFam E3 ubiquitin-protein ligase KEG 481 712 - -
Acco01g2669 1656 ProSiteProfiles Ankyrin repeat profile. 790 822 IPR002110 GO:0005515
Acco01g2669 1656 MobiDBLite consensus disorder prediction 122 157 - -
Acco01g2669 1656 CDD RING-HC_KEG-like 41 97 - -
Acco01g2669 1656 ProSiteProfiles Ankyrin repeat profile. 757 789 IPR002110 GO:0005515
Acco01g2669 1656 ProSiteProfiles Ankyrin repeat profile. 542 575 IPR002110 GO:0005515
Acco01g2669 1656 SUPERFAMILY Ankyrin repeat 537 865 IPR036770 -
Acco01g2669 1656 Pfam RING-type zinc-finger 44 87 IPR027370 -
Acco01g2669 1656 Gene3D - 475 672 IPR036770 -
Acco01g2669 1656 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 39 1655 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Acco01g2669 1656 Gene3D - 673 796 IPR036770 -
Acco01g2669 1656 Gene3D Transferase(Phosphotransferase) domain 1 163 463 - -
Acco01g2669 1656 ProSiteProfiles Zinc finger RING-type profile. 44 90 IPR001841 -
Acco01g2669 1656 SUPERFAMILY Protein kinase-like (PK-like) 166 472 IPR011009 -
Acco01g2669 1656 ProSiteProfiles Ankyrin repeat region circular profile. 757 789 - -
Acco01g2669 1656 Gene3D - 797 895 IPR036770 -
Acco01g2669 1656 ProSiteProfiles Ankyrin repeat region circular profile. 542 575 - -
Acco01g2669 1656 Pfam Ankyrin repeats (3 copies) 617 696 IPR002110 GO:0005515
Acco01g2669 1656 Pfam Ankyrin repeats (3 copies) 735 821 IPR002110 GO:0005515
Acco01g2669 1656 Pfam Ankyrin repeats (3 copies) 504 603 IPR002110 GO:0005515
Acco01g2669 1656 MobiDBLite consensus disorder prediction 1 31 - -
Acco01g2669 1656 SMART ring_2 44 89 IPR001841 -
Acco01g2669 1656 MobiDBLite consensus disorder prediction 7 26 - -
Acco01g2669 1656 Pfam Protein kinase domain 199 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2669 1656 SUPERFAMILY RING/U-box 32 95 - -
Acco01g2669 1656 ProSitePatterns Zinc finger RING-type signature. 63 72 IPR017907 -
Acco01g2669 1656 ProSiteProfiles Ankyrin repeat profile. 611 643 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 611 640 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 823 858 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 717 752 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 576 605 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 499 528 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 542 572 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 679 710 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 644 675 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 790 819 IPR002110 GO:0005515
Acco01g2669 1656 SMART ANK_2a 757 786 IPR002110 GO:0005515
Acco01g2669 1656 PRINTS Ankyrin repeat signature 543 558 IPR002110 GO:0005515
Acco01g2669 1656 PRINTS Ankyrin repeat signature 806 820 IPR002110 GO:0005515
Acco01g2669 1656 Pfam Mind bomb SH3 repeat domain 1275 1396 IPR040847 -
Acco01g2669 1656 Pfam Mind bomb SH3 repeat domain 1532 1650 IPR040847 -
Acco01g2669 1656 Pfam Mind bomb SH3 repeat domain 1022 1142 IPR040847 -
Acco01g2669 1656 Pfam Mind bomb SH3 repeat domain 1402 1523 IPR040847 -
Acco01g2669 1656 Pfam Mind bomb SH3 repeat domain 1151 1269 IPR040847 -
Acco01g2669 1656 Pfam Mind bomb SH3 repeat domain 898 1016 IPR040847 -
Acco01g2669 1656 ProSiteProfiles Protein kinase domain profile. 168 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2669 Acco-ChrAcco01 43827745 43837521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2669 176 460 MAP Kinase Kinase Kinase AT4G08470 27.336 4.18e-17 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Acco01g2669 Pkinase 1.7e-29 CL0016