Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2660 ATGGCTTCCAGGATTATACAAGAACCAGAATCTTACAGAGTCGAAGAAGAAATTGAAGAAGAAGAAGATGGCGATGGAGAGCCCGAAGGTTGGGATGACTGGAACGGGGATGATGATGAGGGAGGTTCAGGATCGGACATTCTCTGTCTCTTCTGCGATTCCAAGTACAGTTCGTGCGGTTCATTGTTTGAGCACTGCGCCAAAGTTCACTACTTTGATTTTCATCGCATCAGGAAAGCTCTTAGCTTGGATTTTTATGGCTCTTTCAAGCTCATTAATTACATACGCTCACAGGTAGCGGATGACAAATGTTGGAGCTGTGGATTGACATTCCAGTCTAACAAAGATTTACTGAATCATTTGCATGACACAGTAAACTTGAAGGATATCAAGTGTCTATGGGATGATGAGAGATATCTGAAACCTTTCATACAAGATGATTCGTTGCTATACAGTTTTGATGAATCTGAAGAAATTGAAGACGATCAGTTTACACCAATTAATGAGGAGGAACTAATGGGGGATTTGAAGAACTCTGAAGAGATTTGTTATGGCGATGATAAAAATACCGTGGAAAAGATGGTGCTTAATGCGGATGACTGTAATTTGTCTAGAGTGGATGGAACTACTATTTCTGTTAATGGTATTAACAGTCCTAGTACATCAGACAATGATCTTATTAATGATAAGGACTCAAGAGGGTTTGTTTCATCAGATGACAAGAATAAAGAAGGACGTATGATATCTAACTCTTCAAGTCGTCTTGCGAAGCACATCATGAAGGTTAATGAAAATTATTTTGGAGCTTACAGTTCATTTGGCATTCACCGTGAGATGCTGAGTGATGAGGTGAGAATGGACGCATATGGGACAGCTATTTTGAAGAACCCCTCTCTCCTAAAGGGTGCTGTAGTTATGGATGTAGGTTGCGGAACTGGAATCCTCAGCCTATTTGCAGCTCAAGCAGGGGCTTCAAGGGTGATTGCAATTGAGGCTAGTGCCAAAATGGCAGCAGTGGCGTCTAAGGTTGCAAGTGATAATGGTCTTTTGCGTGCTAAAAACCTAAGTCAAGCTGATGGCCTCCAGAAGGGAGTAATGGAAGTCGTCCAGGGTATGGTTGAAGAGGTTGATAAAAACGTTGAACTCCAACCTCACAGTGTTGATGTATTATTGAGTGAATGGATGGGATATTGCCTGCTGTATGAGTCTATGCTTAGCTCAGTTCTCTATGCCCGGGACCGTTGGTTGAAGCCTGGAGGGGCCATTCTTCCAGACACAGCAACCATTTTTGTTGCAGGTTTTGGGAAAGGGGGTACAAGTCTTCCTTTTTGGGAGAATGTGTGTAGTTTTGACATGTCTTGCATTGGCAAGGAGTTGGTGAACGATGCTGCCCAATTTCCAATAGTTGATGTTTTGGACAGTGAAGATTTGGTCACCGATTCTGTGATTCTTCAGTCTTTTGACTTGGCAACTATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACATTGGAGTCAATATTGAACGTTACCGACACAAAACATTTAGATTCAAAAACAGGATGCTGCTGGTGTTATGGAGTTGTCCTGTGGTTTGAAACTGGATTTACGAGCAGGTTCTGCCGTGAAGCACCAGCCGTGTTGTCAACATCTCCATACACACCAAAAACACATTGGTCACAAACAATCTTAACCTTTCGGGAACCCATTGCCATGGGATCCAAAAAAGCTACTGGAGGTAAAGTGGCAGCTGTTGGTACTGATGTTTACCCAGCTGCAAAGATTGATCTGCGCATTAGTATTGTCCGGTCGACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCCGTTGGGGTCAGTCCTGATGGTTGGAGACGCAGTTGGCCTGCACAACTGTTTAGCCTGCAATAG 1914 0.4316 MASRIIQEPESYRVEEEIEEEEDGDGEPEGWDDWNGDDDEGGSGSDILCLFCDSKYSSCGSLFEHCAKVHYFDFHRIRKALSLDFYGSFKLINYIRSQVADDKCWSCGLTFQSNKDLLNHLHDTVNLKDIKCLWDDERYLKPFIQDDSLLYSFDESEEIEDDQFTPINEEELMGDLKNSEEICYGDDKNTVEKMVLNADDCNLSRVDGTTISVNGINSPSTSDNDLINDKDSRGFVSSDDKNKEGRMISNSSSRLAKHIMKVNENYFGAYSSFGIHREMLSDEVRMDAYGTAILKNPSLLKGAVVMDVGCGTGILSLFAAQAGASRVIAIEASAKMAAVASKVASDNGLLRAKNLSQADGLQKGVMEVVQGMVEEVDKNVELQPHSVDVLLSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCSFDMSCIGKELVNDAAQFPIVDVLDSEDLVTDSVILQSFDLATMKPNEVDFTATATLESILNVTDTKHLDSKTGCCWCYGVVLWFETGFTSRFCREAPAVLSTSPYTPKTHWSQTILTFREPIAMGSKKATGGKVAAVGTDVYPAAKIDLRISIVRSTEHRSIDISLEAVGVSPDGWRRSWPAQLFSLQ 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2660 637 MobiDBLite consensus disorder prediction 1 37 - -
Acco01g2660 637 MobiDBLite consensus disorder prediction 226 247 - -
Acco01g2660 637 CDD AdoMet_MTases 305 423 - -
Acco01g2660 637 Pfam Methyltransferase domain 305 420 IPR041698 -
Acco01g2660 637 MobiDBLite consensus disorder prediction 217 248 - -
Acco01g2660 637 Gene3D - 427 624 - -
Acco01g2660 637 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 50 617 IPR025799 GO:0016274|GO:0018216
Acco01g2660 637 SUPERFAMILY beta-beta-alpha zinc fingers 27 158 IPR036236 -
Acco01g2660 637 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 263 594 IPR025799 GO:0016274|GO:0018216
Acco01g2660 637 Gene3D Vaccinia Virus protein VP39 255 424 IPR029063 -
Acco01g2660 637 FunFam Protein arginine N-methyltransferase 6 259 424 - -
Acco01g2660 637 MobiDBLite consensus disorder prediction 13 37 - -
Acco01g2660 637 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 270 577 IPR029063 -
Acco01g2660 637 Pfam C2H2 type zinc-finger (2 copies) 49 123 IPR041661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2660 Acco-ChrAcco01 43727425 43730963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2660 2 636 C2H2 Transcription Factor Family AT3G12270 54.224 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco01g2660 Methyltransf_25 2.6e-09 CL0063