Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2620 ATGAAGAACTTTCTATCAGAAGGAGGATGTGGCAAAGTGTATAAAGGGGAGCTTCGTGATGGGATGAAGATAGCTGTGAAGAAGCAACACAACAGCAAGGAATTCAAGACAGAAGTTGAAGCTCTGAGGAGAGTGTGGCATGAGAATGTTGTTGTCATGTTGGGATCTTGCTCCGAAGGAATTCATAGCCTCCTTGTCTATGAATTTGTCTGCAATGGTTCTCTCAACCAGCATTTACACCAACACTGTAGGAAACCTCTGAGTTGGAAGAACAGAATAAAAGTGGCAATGGGAGCAGCAAGAGGATTACTATATCTGCATGACAACAACATCATTCACAGAGACGTGACCCCTAACAACATCCTTCTTACTCATGACTTTGAAACCTTGCTGGGAGATTTTGGGCTGGCAATAACGAGTGAAGAGAAAGAGACATCATCAGAAGAATGTGTAGGAGATGAGGTTTATATGGCGCCAGAATATGCTGAACATGGAAAATTATCAACAAAAACAGATGTTTACTCTTTTGGCGTGGTTCTCTCACAGCTTATTACTGGCATCAGAACTACTGATAGAAGGAGAATTGGAGAAAGCCGAAGCCTTGTCGATTGGGCAAGGCCATTGTTGAGAGAAAAGAATTGTGGGAGAGTGATAGATGAGAGGTTAATGGAAGATCATGATTGCCATCAGTTGTATTCGATGAGTCTTGCTGAGTCTTGTCTCTATAGAGATCCTCACAAGCGTTTGACTATGGCCAAGGTGGTGGAATGCTTGAGTCATATTGCAGAAGGATGCACATGCAATGATAAGATAAAGAAGTGTGGTTCATCTTCCCACACAGATCCATCACCCCAACTCAAGGTTGAATCAGTCCCACCCTTTCCAAAAATAATATAA 897 0.4236 MKNFLSEGGCGKVYKGELRDGMKIAVKKQHNSKEFKTEVEALRRVWHENVVVMLGSCSEGIHSLLVYEFVCNGSLNQHLHQHCRKPLSWKNRIKVAMGAARGLLYLHDNNIIHRDVTPNNILLTHDFETLLGDFGLAITSEEKETSSEECVGDEVYMAPEYAEHGKLSTKTDVYSFGVVLSQLITGIRTTDRRRIGESRSLVDWARPLLREKNCGRVIDERLMEDHDCHQLYSMSLAESCLYRDPHKRLTMAKVVECLSHIAEGCTCNDKIKKCGSSSHTDPSPQLKVESVPPFPKII 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2620 298 ProSitePatterns Tyrosine protein kinases specific active-site signature. 111 123 IPR008266 GO:0004672|GO:0006468
Acco01g2620 298 PANTHER OS01G0253100 PROTEIN 2 262 - -
Acco01g2620 298 PIRSF ILK 20 277 - -
Acco01g2620 298 Gene3D Transferase(Phosphotransferase) domain 1 70 278 - -
Acco01g2620 298 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2620 298 Pfam Protein tyrosine and serine/threonine kinase 3 258 IPR001245 GO:0004672|GO:0006468
Acco01g2620 298 Gene3D Phosphorylase Kinase; domain 1 1 69 - -
Acco01g2620 298 SUPERFAMILY Protein kinase-like (PK-like) 3 258 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2620 Acco-ChrAcco01 43354646 43362908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2620 2 276 Trihelix Transcription Factor Family AT5G38560 41.237 1.77e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Acco01g2620 PK_Tyr_Ser-Thr 5.6e-45 CL0016