Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2617 ATGCAACCATTTTCGCAGCATCACTTAGTTCGAATTCTAGGGAAGCTCGCCTACGAGAAATCACAGCACACTTTGGGGAAACAAGGTATATTGGTTAGGTTCTTGAGGGAAAACAGTGGTTTTGAAGCTAGGTCTCTACAATGGAAGGAGGATCAGGCCAAAACTTTGTTCCTTCATCAAGTTCTTTATACAGACAAGTCCACGGTTTTGGATGCTAAGTCTTTGCATTGTGTGCCACCAATTTTCCCGATGTTATCTCAAGGTCCTTCCTCTGGTCAGGAGGATGCTCCTCCCTCTGGAGTGACAATAGAGTTACGAGACACCCATTTTTCTGCATTCTGCTTCCTCTCTCAACTTCAATTTCGCCTCTACCCTTTGCTTCTTGAAATAAAAGCATCTGCGATCTTCAATCACGTTCGTAAGGATGAAACTACAGTGACACATTTGGGCGTCTCTGCAATGGAAGGAGGATTAGGCCAAAACTCTGTTCCTTCATCAAGTTCTATTGACAAGTCCACGGTTTTGGATGTTAAACCTCTGCGTTGCATGTTACCAATTTTCCCAATGTCTTCTCAAGGTCCTTCCTCCGGTCAGTGTCCTTCTGGGTTTGCTCCTTTTTTCCCCTTTGGCGGACCTCAAGAATCTCATGCATGGACTGATCCTGATCAGGATGCTCCTCCCTCTGGAGTGACACTAGAAGTTCCGATGCCTACTCCTCTCCGTTCATTCAGGAGCCCTATAGGCTCTACTCCATCAAAACATAAAGCACTGCGTGGGAGCAGCTCAAGATCATCCAAAGGAAAGACCCAGCAGAGCCAAGAATCATTAATGGATTTAAGTTCTGTAATTGGTATTAGCCCAGCCCAACGAGCTGATGGTAGCCGGGAAGTGGTTAACCTTGTACTCATGGAGTTTGATGCGCTCCGAAGAAGAATTGTCCAACTTGCTGATGCTGGGGAATCTGTTTCAGGAGTAACCAAGCGTGGAGATTTGAAAGCTGGCAATTTGTTGATGACTGCGGGCATTCGAACAAACATGAACAAAAGAGTAGGTGCAGTTCCTGGAGTTGAGACAGGGGACATTTTCTTTTTCAGAATAGAATTATGTGTTGTGGGGCTACATGCTCAGTCCATGGGTGGGATTGACTCCTTGACCATCAAGGGTGGGCTGGAGGAAGAACCCTTGGCTATAAGCATTGTTTCGTCATATGAATATGATGACCATGCAGATGATGATGATGTTTTAATTTATAGCGGACAGAGTGGGAACTTTGGCAAGAGAGACAGGGTGGCATCTGATCAGAAGCTTCAAGGGGGTAATCTTGCTCTTGAAAGGAGTTCAAGACGGCACAATGAAGTGAGAGTCATCCGAGGCATGAAAGATGCAGCTAATTCAGGTGCAAAAATCTATGTCTATGATGGTCTGTACAAAATTCAAGATTCATGGATAGAAAAGGGGAAACATGGTAGTGGTGTTTTCAAGTACAAGATGGTGAGAATGCCCGGACAGCTTAGTGCATTTTCTGTTTGGAAATCAGTTGAGAAGTGGAAGACAGACTGTTCTTTGAGGACTGGACTTATTCTTTCAGATCTCTCTTCAGGAGCTGAGAGTGTTCCTGTACCACTTGTCAATGATGTTGACCATGAGAGGTTGCCTGGTGGTTTCACTTATTTTCATTCCCTCAGATATACAAAACCGTTCAGCTTAATGCAGTCTTCTAGTGGCTGCAGCTGTACAAAACCTTGTGTCCCTGGTGATCTGAATTGCTCTTGTATTCGGAGGAATGAAGGCGATCTTCCATATACTGGCAATGGCATTCTAGTAAGTCGTAAGCCATTAGTTCATGAATGTGGTCCCACATGCCGTTGTTTCCCTAACTGCAAAAACCGAGTATCCCAGATGGGTTTAAAGCATGCCTTTGAAGTATTCAAAACAAGTGATAGAGGATGGGGTCTGCGATCATGGGATCCTATTCGTGCTGGTTCTTTTATTTCTGAATATGCCGGAGAAGTTATTGACAAAGGAAGCTTAAATCAAAACGAGGAGTTGGCAATGAAAGATGAGTATGCTTTTAATACCAACCGAATTTATCCTCCCTTTAAGTGGAATCATACACCTCAGTTATTGGAAGAAGTGAGTTCAAATGACTCTAGTGAAGATTATGATATTCCATCTCCTCTAGTTATAAGTGCTAAAGAGTGTGGAAATGTGGCTAGATTCATGAATCATAGCTGCTCCCCAAATGTTTTCTGGCAGCCAGTCGTGTATGAAGAAAACAATCAATCCTTCCTTCATATTGCATTTTTCTCTCTCAAACACATTCCTCCAATGACAGAGTTGACGTACGATTATGGGGTTTCCCATTCTGATCGTGCTGAGGGTAGTGGAATACCCAGGGGTAGAAAAAAATGCTTATGTGGATCATCAAAATGCCGTGGTTCTTTTGGTTAA 2451 0.4366 MQPFSQHHLVRILGKLAYEKSQHTLGKQGILVRFLRENSGFEARSLQWKEDQAKTLFLHQVLYTDKSTVLDAKSLHCVPPIFPMLSQGPSSGQEDAPPSGVTIELRDTHFSAFCFLSQLQFRLYPLLLEIKASAIFNHVRKDETTVTHLGVSAMEGGLGQNSVPSSSSIDKSTVLDVKPLRCMLPIFPMSSQGPSSGQCPSGFAPFFPFGGPQESHAWTDPDQDAPPSGVTLEVPMPTPLRSFRSPIGSTPSKHKALRGSSSRSSKGKTQQSQESLMDLSSVIGISPAQRADGSREVVNLVLMEFDALRRRIVQLADAGESVSGVTKRGDLKAGNLLMTAGIRTNMNKRVGAVPGVETGDIFFFRIELCVVGLHAQSMGGIDSLTIKGGLEEEPLAISIVSSYEYDDHADDDDVLIYSGQSGNFGKRDRVASDQKLQGGNLALERSSRRHNEVRVIRGMKDAANSGAKIYVYDGLYKIQDSWIEKGKHGSGVFKYKMVRMPGQLSAFSVWKSVEKWKTDCSLRTGLILSDLSSGAESVPVPLVNDVDHERLPGGFTYFHSLRYTKPFSLMQSSSGCSCTKPCVPGDLNCSCIRRNEGDLPYTGNGILVSRKPLVHECGPTCRCFPNCKNRVSQMGLKHAFEVFKTSDRGWGLRSWDPIRAGSFISEYAGEVIDKGSLNQNEELAMKDEYAFNTNRIYPPFKWNHTPQLLEEVSSNDSSEDYDIPSPLVISAKECGNVARFMNHSCSPNVFWQPVVYEENNQSFLHIAFFSLKHIPPMTELTYDYGVSHSDRAEGSGIPRGRKKCLCGSSKCRGSFG 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2617 816 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 334 518 - -
Acco01g2617 816 ProSiteProfiles YDG domain profile. 351 499 IPR003105 -
Acco01g2617 816 SMART G9a_1 346 503 IPR003105 -
Acco01g2617 816 Pfam SET domain 649 785 IPR001214 GO:0005515
Acco01g2617 816 ProSiteProfiles Post-SET domain profile. 800 816 IPR003616 -
Acco01g2617 816 MobiDBLite consensus disorder prediction 239 276 - -
Acco01g2617 816 Pfam Pre-SET motif 532 630 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco01g2617 816 Gene3D SET domain 522 815 IPR046341 -
Acco01g2617 816 ProSiteProfiles Pre-SET domain profile. 574 635 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco01g2617 816 Pfam SAD/SRA domain 350 503 IPR003105 -
Acco01g2617 816 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 255 810 - -
Acco01g2617 816 SMART set_7 638 791 IPR001214 GO:0005515
Acco01g2617 816 MobiDBLite consensus disorder prediction 243 276 - -
Acco01g2617 816 ProSiteProfiles SET domain profile. 638 785 IPR001214 GO:0005515
Acco01g2617 816 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 118 816 IPR025794 GO:0016571
Acco01g2617 816 Gene3D - 335 521 IPR036987 -
Acco01g2617 816 SUPERFAMILY PUA domain-like 333 522 IPR015947 -
Acco01g2617 816 SMART preset_2 528 622 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco01g2617 816 SUPERFAMILY SET domain 537 813 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2617 Acco-ChrAcco01 43323274 43329041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2617 154 816 Su(var)3-9 homologs AT1G73100 53.052 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco01g2617 SAD_SRA 6.7e-45 CL0178