Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2607 ATGATGACGTCCTGTCCGTCCAAAAACCTATGGATTCAACGGCAACAATGCCCTTGTGGAGATTGGAAATGTTACGTGACATATGAGGGAGATGGTGAAGAGATTTCAGCTGGACCGGAATTGGTGAAGACAACAGAGAAAGCATCATCAGAAGCTATGGTTTCACCTTATGTAGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAATATTATGGGAATTTCGCCCGGAAGAATGGGTTCTCTATTAGAAAAGAAAGATCCAGACTTAGCCCGCAATTAGGCGTTTATAAACGTGACTTTGTTTGTTATCGTTCTGGGTTTGCCCCAACGAAGAAAAAGTCTAATGGAGAACACCATAGAGATAGAAAATCCGTACGATGTGGATGTGATGCAAAAATGTATCTGTCAAAGGAGATTGTGGATGGAGTTTCTCACTGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAAGATGACCAAGTGCGGCTTCTTCCAGCATATCGCAAAATACAAGAGGCTGATCAAGAGCGTATACTCTTACTTTCTAAAGCTGGGTTTCCAATTCATCGAATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGCGGGCAACTGCCATTCTTGGAGAGGGATGTGAGGAATTTTGTTCAAAACCGGAAGAAGGTCATTCAGGAAAATGAGGCATTGCTAAGTGAGAAAAGAGAAAATGATGTATTGGAACTTCTTGAGTCATGCAAAGCCATGAAAGAGACTGATGATGATTTTGTATACGAATTTACAGTGGATGGGAATGAAATGCTTTTGAATATAGCCTGGTCTTATAGTGATTCTGTTCGTGCTTATTCTATGTTTGGTGATGTGGTTTATCTTGACACCACATATCGATCAATCACATACGGATTGGTCTTTGGAGCATGGTTTGGTATTGACAACTATGGTAGAACCATTTTCTTTGGTTGTGTTATATTGCAGGATGAAACGCCTGGGTCCTTCTCTTGGGCACTACAGAGTTTTGTCCGACTTATGAAAGGAAGATGCCCACAAACAATTTTAACCAATATTGACCCTAGCCTTAGAGATGCCATAAGAAGCGAATTGCCAGGAACTAAGCATGTAATCTCTATATGGTGTATAATGCCCAAGGTACCTTGCTGGTTTTCTCTTCCTCTTGGGCCTCGCTATGAAGAATTTAAATCTGAGTTTGATGCATTATATCACATTGAGAATTCTGAGGAATTTGAACTTCGATGGAACCAAATGACATCTGCCTTCGGTCTTGGATCAGACAGGCATATTGATCTTCTCTACTCTCTGCGGGCATCTTGGGCATTGTCTTATGTTAGAGGTTTCTTTCTGGCTCAGACGGCAACAGCAGCTTACTCAAAGTCATTAGACAGTTTTTTGAAAGGCATCTTTAGCGCACAAACATGTCTACGGAGCTTTTTTGAGCAGGTTAGCATTTCTGCAAATGTTCTTCATCATGCTCGTCATGAAACTCCATATATGCGCCTCAAAAGTTGCATACCTATTGAAGAGCATGCCCGGAGTATATACACACCTTTTGCTTTTAATGCCTTGCAACAAGAATTATTGCTAACAATGCAATATGCTGCATCGGAAATGTCCAACGGATCATATATTGTACGCCACTTCAAAAGCTTGGATGGCGAGCGTCTTGTGATATGGATAGCTGAAGATGAACAAATCCATTGCTCTTGCAAGGAATTTGAATCCTCAGGGATATTGTGCAGACATGCTCTCCATGTATTCGCCATAAAGAATTACTTTCAGCTCCCAGATAAGTATTATTTAAGTAGATGGTGGCAACATGAGTCCTCTTTACTTCTTGATAATGATAATAATAATAATAATCAAAGTATTGAGGATGAATGGTTTCAAGAATACCAGTCCCTTGCTGAAACGTTGTTTGCTGAATCTTCAATTACAAAGGAGCGATCTGACTTTGCTCGCAGAGAACTGACAAAGGAAATTAATAGGATTCTTAGTGAGGTTAGAAATTTGCCTGAAAATGATGGGGTCACAATGAACTTGACTATTTCACCAAACATTTAG 2091 0.4008 MMTSCPSKNLWIQRQQCPCGDWKCYVTYEGDGEEISAGPELVKTTEKASSEAMVSPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRLSPQLGVYKRDFVCYRSGFAPTKKKSNGEHHRDRKSVRCGCDAKMYLSKEIVDGVSHWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVIQENEALLSEKRENDVLELLESCKAMKETDDDFVYEFTVDGNEMLLNIAWSYSDSVRAYSMFGDVVYLDTTYRSITYGLVFGAWFGIDNYGRTIFFGCVILQDETPGSFSWALQSFVRLMKGRCPQTILTNIDPSLRDAIRSELPGTKHVISIWCIMPKVPCWFSLPLGPRYEEFKSEFDALYHIENSEEFELRWNQMTSAFGLGSDRHIDLLYSLRASWALSYVRGFFLAQTATAAYSKSLDSFLKGIFSAQTCLRSFFEQVSISANVLHHARHETPYMRLKSCIPIEEHARSIYTPFAFNALQQELLLTMQYAASEMSNGSYIVRHFKSLDGERLVIWIAEDEQIHCSCKEFESSGILCRHALHVFAIKNYFQLPDKYYLSRWWQHESSLLLDNDNNNNNQSIEDEWFQEYQSLAETLFAESSITKERSDFARRELTKEINRILSEVRNLPENDGVTMNLTISPNI 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2607 696 ProSiteProfiles Zinc finger SWIM-type profile. 565 600 IPR007527 GO:0008270
Acco01g2607 696 Pfam FAR1 DNA-binding domain 70 161 IPR004330 -
Acco01g2607 696 Pfam SWIM zinc finger 572 596 IPR007527 GO:0008270
Acco01g2607 696 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 661 IPR031052 GO:0006355
Acco01g2607 696 SMART 26again6 575 602 IPR006564 GO:0008270
Acco01g2607 696 Pfam MULE transposase domain 293 385 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2607 Acco-ChrAcco01 43155962 43158210 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco01g2607 MULE 7.5e-15 CL0219