Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2598 ATGGTGGCGGCTTCCGATTTTCCGAACGAATTTAGATTACGAAGGGTACGGATTTCAGAACATTTGTTTTCTTGGAGATCGACTGGTAGGGATGATGTCGAAGAGATGAACACGGCCCAAGTTAGTAATTTTAGTTTCGAAGAAGCTGAGGGATTGACAGGCGAGATTGAAAAAGAGTCTAAAATAGTTTCGGAGATTTTGAGGATCAAAGAGATTCTCTATAAGGAAGAGGTTGATTCAGTGTTGTTTGAGTCATTGAGGAGGCTGCAGCCGCTGGCACTTACCGTGGACCTTCTTAAGGAAACTGAGATTGGAAAGGCTATCAATCCTCTCAAGAAGCATGGCTCAAACGAGATCCGTCAACTCGCACGAACTCTTATCAATGGTTGGAAAGCAATTGTAGATGAATGGATCAACTCGACAAAAGCTATAGAAGCAAAAGGCATCCTAGACTCAATTAGTCTATCCATCTTTAATGAAGGAGAAAGGCTTCATTCGCCTGTAGACGAAGTTGCTATGAGATATAGTAAACTGGTTTACACTGATTCTAGCTCTGGAAGGCAACCGAAATCCAGCTTGCCGCAAAAAAGCAACATAGGACCAAAGGTACAGCAGAAAAAAGAGATTTTTAAGATAAAAAAGAGGCCTCTTGTTGCTCAGCAAGATTGTCAAAAATTCAAGCGTTCAGATGATGTTTCAGTCCAAGCAAAACTAGAAGCCACTAAGAGGAAACTCCACGACTCTTATCAACAAGCTGCAAATGCCAAGAAGCAGCGAACAATACGGGTGATAGAGTTGCATGATCTTCCAAAGCAAAGGAACATTGACCCACGAAATCAACACTCCAAGCTTTGGAAGGTTCTGGGACGAAGAAGATAG 879 0.4221 MVAASDFPNEFRLRRVRISEHLFSWRSTGRDDVEEMNTAQVSNFSFEEAEGLTGEIEKESKIVSEILRIKEILYKEEVDSVLFESLRRLQPLALTVDLLKETEIGKAINPLKKHGSNEIRQLARTLINGWKAIVDEWINSTKAIEAKGILDSISLSIFNEGERLHSPVDEVAMRYSKLVYTDSSSGRQPKSSLPQKSNIGPKVQQKKEIFKIKKRPLVAQQDCQKFKRSDDVSVQAKLEATKRKLHDSYQQAANAKKQRTIRVIELHDLPKQRNIDPRNQHSKLWKVLGRRR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2598 292 MobiDBLite consensus disorder prediction 182 202 - -
Acco01g2598 292 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 62 144 IPR035441 -
Acco01g2598 292 ProSiteProfiles TFIIS N-terminal domain profile. 64 137 IPR017923 -
Acco01g2598 292 Pfam TFIIS helical bundle-like domain 86 134 IPR017923 -
Acco01g2598 292 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 181 281 IPR044805 -
Acco01g2598 292 SMART TFS2_5 63 136 IPR003617 GO:0005634
Acco01g2598 292 Coils Coil 238 258 - -
Acco01g2598 292 CDD TFIIS_I 65 135 - -
Acco01g2598 292 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 54 147 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2598 Acco-ChrAcco01 43030130 43031926 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Acco01g2598 Med26 1.9e-12 No_clan