Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2587 ATGTCGGCGTTTTCAAATCTCCCTCTTCTCTTCCTCTTCTTCTTCGTCTTCAATTCCTCTCTTCCATTATTACTCCTCCAAGCCCAACCTCCTCCTCCTTCGTCTCCTTCGGCTCTCTGCAAGTTCACATTGTACCCTAAACTATGTCGTTCCATGCTCTCCGTCATCTCCTCCACCCCCTCCGACCCCTACAATGCCGGCAAGTTCTCCGTCAAACAGAGCCTCAAGCAAGCCAAGAAACTCCTCAAGGTCTTCGACGACTTCCTCCGCAGCAACCGCCATTCTCAATCCTCCCCGGAGGTTCGCGCCCTTGACGACTGCCGCGACCTCAGCCTCCTCAGCCTCGACTACCTGGAAGCCGTCTCCGCCGACCTCCAAGCCGCTGCAACGCCCTCCGCCGAGCTGGCAGACAAGGTCGAGAGCTACCTGAGTGCGGTGGCGACCAACCACTACACGTGCTACGACGGGCTAGTGGCGGCCAACAGTAATATAGGGAAGGTGATGGGGGTGGCGTTGAGGAATGTGACGGAGATGTATAGTGTGTCGTTAGGATTGGTGGGTGAAGCTTTGAATCAAAAGGTGAAGAACAAGTTCAAGACTCGCAAACATGGACTTCCTTCTCAGTCTTACAAAGTCAGACAGCCTCTTCAGAAGCTCATTCAAGTTCTTCGTGAGAAGTACAGTTGCAACAAGACATCATCATCAAACTGCAGAGGCAGAAGGAGCGAGAAGATTATAGATAGAGAGAGTGAAAGCAAAGGGATTCTGTTAAACAAGTATGCAATTGTGAGCCAGTATGGGAATGATAACTTCACCTCCATTGGAGAAGCCATTGCTGCTGCACCCACAAACCTGAGACCAGAAGATGGTTACTTCCTTATCTATGTCAGAGAAGGATACTATGAAGAATATGTGATTGTTCCTAAACACAAGAAGAACATCTTGCTCATTGGTGATGGTATCAACCAGACTATCATCACAGGCAATCACAGTGTCATTGATGGTTGGACTACCTTCAATTCTTCCACCTTTGCTGTTTCTGGAGAAAGGTTCATAGCAGTGGATATCACATTCAGGAACACAGCAGGTCCAGAGAAGCACCAGGCAGTAGCAGTGAGGAACAACGCTGATCTCTCGACCTTTTATCGATGCAGCTTTGAAGGATACCAAGACACACTCTATGCTCACTCCCTGAGGCAGTTCTACAGAGAATGTGAGATTTATGGTACAGTAGACTTCATATTTGGTAATGCAGCTGTTGTATTCCAAAACTGCAAGATCTATGCCAGGAAGCCACTTCCATTCCAGAAGAATGCCATCACAGCACAGGGCAGAACCGACCCGTATCAGAACACCGGAATCTCAATCCAGAATTGCACCATTGAAGCAGCACTAGATTTGGCTTCAGATATGAATTCAACTAATAATTCTTCTGCCTTGACCTACTTGGGAAGGCCATGGAAGTTATATTCTAGAACTGTGTTCATGGAGTCTTATATTGGGGATGTGATTCAGCCTTCTGGTTGGTTGGAGTGGAATGGGACGGTCGGGTTGGACACATTGTTTTTTGGTGAGTTCAATAATTATGGACCTAGGGCTAACACTAGCAATAGGGTTCAATGGCCTGGTTTTCGTCTTCTGAATGATACTCAGGCTTTCAACTTTACTGTCCTGAATTTTACACTGGGAGATACATGGCTTCCTGACACAGATATACCCTACTCTGCAGGATTACTAGGAAATTAG 1746 0.4742 MSAFSNLPLLFLFFFVFNSSLPLLLLQAQPPPPSSPSALCKFTLYPKLCRSMLSVISSTPSDPYNAGKFSVKQSLKQAKKLLKVFDDFLRSNRHSQSSPEVRALDDCRDLSLLSLDYLEAVSADLQAAATPSAELADKVESYLSAVATNHYTCYDGLVAANSNIGKVMGVALRNVTEMYSVSLGLVGEALNQKVKNKFKTRKHGLPSQSYKVRQPLQKLIQVLREKYSCNKTSSSNCRGRRSEKIIDRESESKGILLNKYAIVSQYGNDNFTSIGEAIAAAPTNLRPEDGYFLIYVREGYYEEYVIVPKHKKNILLIGDGINQTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQNCKIYARKPLPFQKNAITAQGRTDPYQNTGISIQNCTIEAALDLASDMNSTNNSSALTYLGRPWKLYSRTVFMESYIGDVIQPSGWLEWNGTVGLDTLFFGEFNNYGPRANTSNRVQWPGFRLLNDTQAFNFTVLNFTLGDTWLPDTDIPYSAGLLGN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2587 581 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
Acco01g2587 581 NCBIfam pectinesterase inhibitor domain 9 186 IPR006501 GO:0004857
Acco01g2587 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 188 IPR035513 -
Acco01g2587 581 CDD PMEI-like_3 38 186 - -
Acco01g2587 581 Gene3D - 256 578 IPR012334 -
Acco01g2587 581 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Acco01g2587 581 Pfam Pectinesterase 261 563 IPR000070 GO:0030599|GO:0042545
Acco01g2587 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 187 IPR035513 -
Acco01g2587 581 PANTHER PECTINESTERASE 17 568 - -
Acco01g2587 581 SMART PMEI_2 31 185 IPR006501 GO:0004857
Acco01g2587 581 SUPERFAMILY Pectin lyase-like 258 577 IPR011050 -
Acco01g2587 581 FunFam Pectinesterase 256 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2587 Acco-ChrAcco01 42945574 42950411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2587 40 579 Carbohydrate Esterase AT3G10720 59.707 0.0 671