Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2581 ATGGCTTCGTCAAGTTCTAGCAAGGGAGCTGATAAGTACGATTCACCTCTTCCACCGGCCCTTCGTCCTCCTGGAGAATCAGAAAAAGCTGACGTGCCTATGAAGAAAACATCAGATAGAAAGCTCTTACCTATGGCCAGACGTGGTTTTGGATCCAAGGGACAAAAGATTCAACTTCAGACTAACCACTTTAAAGTTAGCATGGACAAGAAAGATGGCTTCTTCTATCACTATACTGTTGCTCTCTTTTATGAAGATAAACGCCCTGTGGAAGCTAAGGCCATAGGGAGAAGGGTTTTAGACAAAGTTTATGAGACCTATGCTTCTGAGCTACAAAGCAAGAGCTTTGCATATGATGGAGAGAAGGCCTTATTCACTATCACTTCACTCCCACGTAACAAGTTCGAATTCATTGTCGTGCTAGATGAAATTTCATCAAACAAGGTTGGAAGGAAAGGAAGCCCTGACAACAAAGAGGGAACTGATAAGAAGAGAATGAGGCGTCCATATCAATCCAAGACATTCAAGGTGGAGATCAGTTATGCTAAGAAAATCTCTATGCAAGAAATTGTACATGCATTGAGCGGTATAGAATCTGGTCATCACCAAGAAGCATTTCAGGTTCTGGACATCATATTAAGGCAGAATGCAGCAAAGCAGGGCTGTTTACTTGTGCGCCAATCATTCTTCCATGACAGAGTGGAAAATTACAAAGACATTGGAGGCGGTGTTCAAGGTTGTCGTGGATTTCATTCGAGTTTCCAAGCCACTCAAGGGGGTTTGTCCCTGAATGTTGATGTGTCGACAACATTGCTTCTTAAGCCTGGTCCAGTGTTGGATTTCCTCTGTGCGAATCAGGATGTTAAACACCCCCGTTTTATAGATTGGACCAAGGCAAAAAGGATGTTGAAAAATCTGCGAATCAAGGTTAACAATATGGAGCAAAAAATCACCGGATTGAGTGATAAGCCCTGCAAAGATCAAACATTTTCCTTGAAGCAAGGAAGAGATGCAAATGGAGAAGAGAAGTCAATTGAAATAACTGTTAGTGAATATTTTGAACGCCATAAAGGCATCAGATTGGTTGATTCAGCTAATTTGCCGTGCATCAATGTTGGCAAACCAAAGAAACCAACTTATTTTCCAATTGAGCTGTGTACCTTGGTTTCATTGCAACGCTACACTAAGGCACTTACCAGTATGCAAAGAGCTTTCCTTTTGGAAGTGTCAAGGCAAAAGCCCCGCGAACGAATGACATATCTGTCAAATTCACTAAGAAACAGCAGATATAATGATGATCCTATGCTTCGTTCTTCTGGAATTACCATTGACTCTGAGTTCACAAAAGTTGAAGGTTGTGTCCTGCCAGCTCCAAAGCTTAAGGTTGGGAGAGAGGAGGATATCAATCCCAGAAATGGGAGGTGGAATTTCAACAACAAGCGACTTTTTCAACCAATGGTGATTGATCGTTGGGCTATAGTCAACTTCTCAGCTCGTTGTGATATTAACTATCTTATTGAAGGCCTGAAGACATGCGCGCGCAATAAGGGGATGTCCTTGAAGGATCCATTTAAAGTGTTTAATGAGGATGCGCACATGAGTCGTAGGCCGCCTACTGTCAGGGTTGAGGAATTGTATGCAACTGTGATGAAGCAGTTGCCTGAATCACCACAGTTTCTATTGTGCATTCTATCAGAGAAGAAGAATTCTGATATCTATGGTCCTTGGAAAAGAATAAATCTTGCAGTTGATGGGAAAGGGGGAGGGATTGTTACACAATGTATTGCCCCAACAAAAATGAATGATCAGTACTTTACCAATGTTCTACTAAAGATTAATGTTAAGCTTGGTGGGATGAATTCATTTTTGGCAATAGAGCGTTCTCTTTCTATACCTATGGTTTCACAGGTGCCTACCTTAATTCTTGGTATGGATGTTTCACATGGCTCTCCTGGTCGATCTGATGTACCATCAATTGCTGCGGTTGTTAGCTCAAGATACTGGCCTCAAATTTCATGTTATAGAGCATCAGTTCGTGCTCAGTCACCAAAGGTTGAGATGATTGCTAATCTGTTCAATGTTGTGTCTGATACTAAGGATGAAGGTATTTTCAGAGAGCTACTTGATAACTTCATTGATACTTCAAGAAGAAGGCCTGGACATATTGTCATATTTAGGGATGGAGTCAGTGAGTCACAATTCAATCAAGTGTTAAATATTGAGTTGCACCAAATCATTCAGGCCTGCAAGCATTTTCAAGAAAGTTGGGATCCAAAGTTTACTGTGATTATTGCTCAAAAAAATCATCACACTAGGTTCTTTCAGGTTCAGGCTAATGCTCAAGAAAATGTCCCACCAGGAACTGTCGTTGATAGTAGAATCTGTCACCCAAAGAACAACGATTTTTACATGTGTGCTCATGCAGGAATGATTGGAACAAGTCGACCTACTCATTACCATGTACTTCATGATGAGATTGGATTCTCTGCCGATGGTTTGCAAGAACTTGTGCATTCTCTTTGTTATGTGTATCAGAGGAGCACGACAGCTATATCAGTAGTTGCCCCAATTTGTTATGCTCACTTAGCAGCAGCACAAGTGGCACAGTTTATCAAGTTTGATGAATTTTCAGAGTCTGGTTCTAGTCATGGAGGACTCACTTCAGTTGGTACGCCTCAAGTGCAAGAGTTACCTCGTCTTCATGAAAAAGTCCGCAACTCCATGTTCTTCTGTTAG 2736 0.4145 MASSSSSKGADKYDSPLPPALRPPGESEKADVPMKKTSDRKLLPMARRGFGSKGQKIQLQTNHFKVSMDKKDGFFYHYTVALFYEDKRPVEAKAIGRRVLDKVYETYASELQSKSFAYDGEKALFTITSLPRNKFEFIVVLDEISSNKVGRKGSPDNKEGTDKKRMRRPYQSKTFKVEISYAKKISMQEIVHALSGIESGHHQEAFQVLDIILRQNAAKQGCLLVRQSFFHDRVENYKDIGGGVQGCRGFHSSFQATQGGLSLNVDVSTTLLLKPGPVLDFLCANQDVKHPRFIDWTKAKRMLKNLRIKVNNMEQKITGLSDKPCKDQTFSLKQGRDANGEEKSIEITVSEYFERHKGIRLVDSANLPCINVGKPKKPTYFPIELCTLVSLQRYTKALTSMQRAFLLEVSRQKPRERMTYLSNSLRNSRYNDDPMLRSSGITIDSEFTKVEGCVLPAPKLKVGREEDINPRNGRWNFNNKRLFQPMVIDRWAIVNFSARCDINYLIEGLKTCARNKGMSLKDPFKVFNEDAHMSRRPPTVRVEELYATVMKQLPESPQFLLCILSEKKNSDIYGPWKRINLAVDGKGGGIVTQCIAPTKMNDQYFTNVLLKINVKLGGMNSFLAIERSLSIPMVSQVPTLILGMDVSHGSPGRSDVPSIAAVVSSRYWPQISCYRASVRAQSPKVEMIANLFNVVSDTKDEGIFRELLDNFIDTSRRRPGHIVIFRDGVSESQFNQVLNIELHQIIQACKHFQESWDPKFTVIIAQKNHHTRFFQVQANAQENVPPGTVVDSRICHPKNNDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADGLQELVHSLCYVYQRSTTAISVVAPICYAHLAAAQVAQFIKFDEFSESGSSHGGLTSVGTPQVQELPRLHEKVRNSMFFC 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2581 911 Pfam PAZ domain 279 404 IPR003100 GO:0005515
Acco01g2581 911 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 39 874 - -
Acco01g2581 911 SUPERFAMILY Ribonuclease H-like 551 870 IPR012337 -
Acco01g2581 911 MobiDBLite consensus disorder prediction 152 167 - -
Acco01g2581 911 Pfam Piwi domain 560 872 IPR003165 GO:0003676
Acco01g2581 911 Pfam Argonaute linker 1 domain 225 271 IPR014811 -
Acco01g2581 911 SUPERFAMILY PAZ domain 270 430 IPR036085 GO:0005515
Acco01g2581 911 ProSiteProfiles PAZ domain profile. 316 390 IPR003100 GO:0005515
Acco01g2581 911 MobiDBLite consensus disorder prediction 147 167 - -
Acco01g2581 911 CDD PAZ_argonaute_like 275 389 - -
Acco01g2581 911 Gene3D paz domain 269 394 - -
Acco01g2581 911 Gene3D - 630 911 IPR036397 GO:0003676
Acco01g2581 911 SMART Piwi_a_2 559 872 IPR003165 GO:0003676
Acco01g2581 911 CDD Piwi_ago-like 434 871 IPR045246 -
Acco01g2581 911 MobiDBLite consensus disorder prediction 1 38 - -
Acco01g2581 911 SMART DUF1785_2 223 275 IPR014811 -
Acco01g2581 911 Pfam N-terminal domain of argonaute 55 213 IPR032474 -
Acco01g2581 911 Pfam Argonaute linker 2 domain 416 461 IPR032472 -
Acco01g2581 911 FunFam Protein argonaute 3 631 911 - -
Acco01g2581 911 Gene3D - 454 624 - -
Acco01g2581 911 ProSiteProfiles Piwi domain profile. 559 872 IPR003165 GO:0003676
Acco01g2581 911 Coils Coil 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2581 Acco-ChrAcco01 42895810 42902357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2581 47 911 Eukaryotic Initiation Factors Gene Family AT5G43810 35.951 1.44e-166 509