Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2574 ATGATGAAGAGGTATTCCAGTGCTTCTTCTTCCTCTTGCTCTTCTTCTTCTCCATCTCCATCTCCATCGCCTTCTTCTTCGTCGTCTTCTTCTCTCGAGTTTCAGAATCCTGATCAGACGGAAGCGCGAGGCAGAGCGAGTAATAAGCGAGCCAGAAGAAATGGTAACGGTAACGGTAATGGCAATGGCAGTGGTAATAATAATGATAATAAGTCCAAGAAGGTGAAAGCTATAAGCTCGAGCTCTTCCGCCATTAATGGCGGACGAAGAAGTTCCGTTTACAGAGGAGTCACTAGGCATCGATGGACTGGGAGGTTTGAAGCTCATCTCTGGGATAAGAGTTGCTGGAATAATCTCCAGAATAAGAAGGGACGACAAGGGGCTTATGACAATGAAGAAGCTGCCGCTAGAACCTACGATCTTGCTGCTCTTAAATACTGGGGAAGAGAGTCAACATTGAATTTCCCGATAGAAATATATGCCAAGGAGCTTGAGGAAATGGAGAAGGTCACAAAAGAAGAGTACTTAGCTTCATTGCGACGACAAAGCAGTGGATTTTCTAGAGGTGTTTCTAAGTATCGAGGGGTAGCTAGGCATCACCATAATGGCAGATGGGAAGCTCGGATTGGAAGAGTATTGGGCAACAAATATCTCTACTTGGGCACTTATAGTACTCAAGAAGAAGCGGCTACGGCATACGACTTGGCGGCTATAAAATACAGAGGCGCAAATGCAGTCACCAATTTCGATATTAGCAGATACATCGACAAGATCAACATAATTAACCAGAGCAGCAATGGTGAATCCCAAGAAGACCAAACTGTAATCACAATACCATCACAAGTAGAAGAAGATGAAGAAACACCTCCCAATTCATCCTCCTCATGTTCCTCCGAGTCAGAAAATCTGCAGAACCAGAAGCAACCACCACAACGGCAACTGCAAGACCAAGAAATCGAACCTGAAAATCCTCAAATTCAACCTAATCAGATCTCTCCACTGGAAGAAGAATCCTCTCCGATTGCTCATGTGGACCCTACTACGACGACCGCCGACGAACAGGAGCTTCCATGGATCTCCATGGACGACGGCGGATTCTCTCAGTTTCAAGTTCCAGATCTGTCTGACGGCGACTTACTGAGCGTGTTCAGTGATGGCGCAAGAAGATTCGACGACGACATTGGATTTCTGTTCAGGCCAGATCCCGAGGAGGCCGATTTCAACCTGGAGACAATTTTGAGCAGTCCCAGCTATGGAGACTTGGCGATGGTGGATTCGACGAGGATGGTGGCTGATGATGATTGTGGGCAAGAGAAGTTGCTCTGTTGTGCAAATTCTGCTTCTTGTTCACCAAACTCTTCAGTTTCTTATTCGGATTATACTTCATAA 1389 0.4586 MMKRYSSASSSSCSSSSPSPSPSPSSSSSSSLEFQNPDQTEARGRASNKRARRNGNGNGNGNGSGNNNDNKSKKVKAISSSSSAINGGRRSSVYRGVTRHRWTGRFEAHLWDKSCWNNLQNKKGRQGAYDNEEAAARTYDLAALKYWGRESTLNFPIEIYAKELEEMEKVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAATAYDLAAIKYRGANAVTNFDISRYIDKINIINQSSNGESQEDQTVITIPSQVEEDEETPPNSSSSCSSESENLQNQKQPPQRQLQDQEIEPENPQIQPNQISPLEEESSPIAHVDPTTTTADEQELPWISMDDGGFSQFQVPDLSDGDLLSVFSDGARRFDDDIGFLFRPDPEEADFNLETILSSPSYGDLAMVDSTRMVADDDCGQEKLLCCANSASCSPNSSVSYSDYTS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2574 462 SUPERFAMILY DNA-binding domain 92 158 IPR016177 GO:0003677
Acco01g2574 462 MobiDBLite consensus disorder prediction 1 42 - -
Acco01g2574 462 FunFam AP2-like ethylene-responsive transcription factor 92 158 - -
Acco01g2574 462 ProSiteProfiles AP2/ERF domain profile. 192 250 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 Gene3D AP2/ERF domain 93 159 IPR036955 GO:0003700|GO:0006355
Acco01g2574 462 Gene3D AP2/ERF domain 191 252 IPR036955 GO:0003700|GO:0006355
Acco01g2574 462 FunFam AP2-like ethylene-responsive transcription factor 191 252 - -
Acco01g2574 462 SUPERFAMILY DNA-binding domain 191 252 IPR016177 GO:0003677
Acco01g2574 462 CDD AP2 92 157 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 ProSiteProfiles AP2/ERF domain profile. 93 156 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 PRINTS Ethylene responsive element binding protein signature 232 252 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 MobiDBLite consensus disorder prediction 281 318 - -
Acco01g2574 462 Pfam AP2 domain 92 148 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 Pfam AP2 domain 191 242 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 CDD AP2 191 252 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 MobiDBLite consensus disorder prediction 1 89 - -
Acco01g2574 462 MobiDBLite consensus disorder prediction 51 89 - -
Acco01g2574 462 SMART rav1_2 93 162 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 SMART rav1_2 192 256 IPR001471 GO:0003700|GO:0006355
Acco01g2574 462 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 30 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2574 Acco-ChrAcco01 42794552 42801172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2574 88 254 AP2-EREBP Transcription Factor Family AT5G57390 71.765 5.86e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco01g2574 AP2 1e-08 CL0081