Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2573 ATGGACTCGAATAATGAAGCTGGAAACTCCTCACATTTCGACCCAGCTTTGAAATCATCATCTCGAAGAAGCATAACCTCGAGTCACTCTCGGGGATCCGACAGGGTTTCGGTTCGGGAAGTGACTTTAAGTCATTCAGGATCGAAGCCTGTTCGGTATGGGTCAAAAGGCGCTGATTCGGAAGGATTCAGCATGTCGCGGAAGGAAATCAACGACGAGGATGCGAGGTTGGTTTATATAAACGATCCTGAGAGGACAAACGAGAGGTTTGAATTCTCAGGAAATTCTATTCGTACTGGGAAATACTCCGTCATCACCTTCTTGCCCAGAAATTTGTTCGAACAATTTCATAGAGTTGCTTATATTTATTTCCTTGTAATAGCCGTTCTTAATCAGCTTCCTCAGCTCGCCGTTTTTGGTAGAGGAGTTTCCGTTTTGCCTTTAGCATTTGTTCTGCTTGTTACAGCCGTGAAGGATTTGTTTGAGGATTGGAGGAGACATCGATCAGATAAAGTCGAGAACAGCAGATTAGCGTCTGTTTTAGTTGGTGAACAATTTGTACAGAAGAAATGGAAGGACATTAGAGTTGGTGAAATTGTTAAAATCCATGCAAATGACACCATCCCTTGTGATATTGTGCTGCTATCAACCAGCGATCCAACTGGGGTTGCATATGTGCAAACTATAAATTTGGATGGAGAGTCAAATTTGAAGACTCGATATGCAAAGCAAGAGACCCTTTCAAAGCTCCCTGAGACAGAAAGAATCAGTGGTTTGATTAAGTGTGAAAAACCCAATAGGAACATATATGGGTTTCAAGCTAACATGGAAGTTGATCAGAAGCGTTTGTCACTTGGATCCTCCAATATTGTTCTTCGAGGCTGTGAGCTCAAAAACACTAAATGGGCACTTGGTGTTGCCGTATATTGTGGCGGAGAGACCAAAGCTATGCTCAACAACTCAGGAGCTCCATCTAAGAGGAGCCGGCTGGAGACTCGGATGAACTCCGAGATAATCAAGCTCTCTTTCTTTCTTGTAGCTTTGTGTACTGTCATATCTGTTTGTGCTGCTGTTTGGTTAAAGCGCCACGACGATGAGTTAAATATGTCGCCTTATTATAGGAAGCTGAACTTTAATGAGAGAGAGGACGATGGAGAATTCGCGAGCTATAAGTATTATGGATGGGGATGGGAAATTGTTTTCACATTCCTTATGTCTGTTATAGTTTTCCAGGTCATGATCCCCATATCATTGTACATTTCCATGGAGCTTGTCCGCGTTGGCCAGGCCTACTTCATGATCGGAGACGACAGTATGTATGATGAGACATCAAATTCCAGATTTCAGTGCAGGGCTTTAAACATCAATGAAGATTTAGGGCAAATCAAGTATGTTTTCTCAGATAAAACTGGCACACTTACTGAGAACAAGATGGAGTTTCAATGTGCTAGCATCTGGGGTGTTGATTACAGTAAGACAAATGAAATTCAGGAGAATGAGCAAGTTGAATACTCTGTTGAAGTGGATGGAGTAGTGTTGAGACCCAAGATGAAGGTGAAAGTAAATCCAGAACTTTTGCGGTTATCAAGAGGTAGACTTGAAAATGACAAAGGACAACGAATTCACGACTTCTTCCTAGCATTGGCAGCCTGCAATACCATTGTTCCTCTTCATGTTGGCACATCTGATCCTAAAGTCAAGTTGATAGATTATCAAGGGGAGTCACCAGATGAACAAGCACTGGCATATGCGGCTGCCACCTATGGTTATACTCTTATAGAACGGACCTCAGGCCATATAATGATTGATATTCAGGGAGAGAGACACAAGTTCAATGTCTTGGGCTTGCATGAATTTGATAGTGACCGGAAGAGAATGTCAGTCATATTGGGGTATCCTGACAATTCTGTGAAACTTTTGGTCAAGGGTGCTGATACATCCATGTTAAGTGTAATAAATAAGTCATCAAACATGGACAGAATACATGCAACTGAGAGTCATCTGCACTCTTACTCTTCTCTGGGGTTGAGGACTCTTGTCATTGGAATGAGGGAACTGAATACTTCAGAATTTGAGCAATGGCACCAATCCTTTGAGGCAGCAAGCAATGCTTTGCTGGGTCGGGCTGCTAAACTTCGTAAGATAGCTAGCAATATCGAAAACAACCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAATTGCAGAAAGGGGTGCCAGAATCCATTGAGTCTCTGAGGACTGCAGGTATTCAGGTATGGGTATTGACTGGGGACAAACAGGAAACTGCAATATCAATTGGCTACTCCTCAAAACTCCTAACAGGTGACATGACTCAGATTATAATTAATAGCAAGAATAAAGAGTCCTGTAGAAGGAAATTACAAGATGGCCTCGCTATGTCCAAAAAACTCATGGCTGCTTCTGGTGTTGCCAATGTTACTGGAACTTCTTTTGCTCCTAAAATTCCAATAGCCTTGATCATTGATGGTACCAGCCTTGTGCATGTTCTTGATAATGAACTTGAAGAACAGCTCTTTGAACTAGCAAGCAAATGTTCAGTGGTTCTTTGTTGTCGAGTGGCTCCATTACAAAAAGCTGGGATTGTTGCCCTTGTGAAAAAAAGGACGTCTGACTTGACCCTAGCTATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAAGGTCGGCAAGCTGTAATGGCATCTGATTTTGCGATGGGACAGTTTAGGTTTTTAGTTCCCCTCTTGTTGGTGCATGGACACTGGAATTACCAACGTTTGGGTTATATGATACTATACAATTTTTACAGAAACGCTGTCCTTGTTCTGGTCTTGTTTTGGTATGTGCTCTTCACTGCCTTCACTTTGACAACGGCTATAAATGAATGGAGCAGCATGCTGTACTCAATCGTTTACAGTGCATTGCCAACAATTGTCGTTGGTATTCTTGACAAAGACCTTAGTAAAAGGACTCTTATAAACTATCCTTATCTTTATGGGGCCGGACAGAGACACGAGGCATACAACAAAAAGTTATTTTGGATTACAGTGGTTGATACATTGTGGCAAAGCATTGTTATCTTCTTTGGTGCTTTCTTTGCATATTGGGGAAGCACTATTGATGTAGCAAGCATTGGAGATCTTTGGACTCTTGCAGTGGTTATTGTAGTGAATATACACTTGGCCATGGACGTTATCAGGTGGAATTGGATTACTCATGTTTCCATTTGGGGGTCTATAGTTGCAACTTTCATCTCCGTCATGATCATTGATGCTATTCCCACACTTCCTGGTTACTGGGCCATATTTCATGCGTTAGGAACTGGATCCTTTTGGCTATGTCTGCTTGGAATCATCATCACAGCATTGCTCCCTCGTTTCATGGTGAAGTATATTCATCAATATTACTTCCCTGATGATATCCAGATCTCAAGAGAAGCTGAGAAGGTTGAAGCTTCTAGGGTGATGGTTGGTGGAGACATAGAAATGCATCCCATTCCAGTTGGTCCACCAAGATCATGA 3561 0.4218 MDSNNEAGNSSHFDPALKSSSRRSITSSHSRGSDRVSVREVTLSHSGSKPVRYGSKGADSEGFSMSRKEINDEDARLVYINDPERTNERFEFSGNSIRTGKYSVITFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSVLPLAFVLLVTAVKDLFEDWRRHRSDKVENSRLASVLVGEQFVQKKWKDIRVGEIVKIHANDTIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKLPETERISGLIKCEKPNRNIYGFQANMEVDQKRLSLGSSNIVLRGCELKNTKWALGVAVYCGGETKAMLNNSGAPSKRSRLETRMNSEIIKLSFFLVALCTVISVCAAVWLKRHDDELNMSPYYRKLNFNEREDDGEFASYKYYGWGWEIVFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDDSMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSKTNEIQENEQVEYSVEVDGVVLRPKMKVKVNPELLRLSRGRLENDKGQRIHDFFLALAACNTIVPLHVGTSDPKVKLIDYQGESPDEQALAYAAATYGYTLIERTSGHIMIDIQGERHKFNVLGLHEFDSDRKRMSVILGYPDNSVKLLVKGADTSMLSVINKSSNMDRIHATESHLHSYSSLGLRTLVIGMRELNTSEFEQWHQSFEAASNALLGRAAKLRKIASNIENNLCILGASAIEDKLQKGVPESIESLRTAGIQVWVLTGDKQETAISIGYSSKLLTGDMTQIIINSKNKESCRRKLQDGLAMSKKLMAASGVANVTGTSFAPKIPIALIIDGTSLVHVLDNELEEQLFELASKCSVVLCCRVAPLQKAGIVALVKKRTSDLTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSSMLYSIVYSALPTIVVGILDKDLSKRTLINYPYLYGAGQRHEAYNKKLFWITVVDTLWQSIVIFFGAFFAYWGSTIDVASIGDLWTLAVVIVVNIHLAMDVIRWNWITHVSIWGSIVATFISVMIIDAIPTLPGYWAIFHALGTGSFWLCLLGIIITALLPRFMVKYIHQYYFPDDIQISREAEKVEASRVMVGGDIEMHPIPVGPPRS 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2573 1186 SUPERFAMILY Calcium ATPase, transmembrane domain M 89 1151 IPR023298 -
Acco01g2573 1186 SFLD p-type atpase 450 935 IPR044492 -
Acco01g2573 1186 PRINTS P-type cation-transporting ATPase superfamily signature 884 903 - -
Acco01g2573 1186 PRINTS P-type cation-transporting ATPase superfamily signature 466 480 - -
Acco01g2573 1186 PRINTS P-type cation-transporting ATPase superfamily signature 767 777 - -
Acco01g2573 1186 MobiDBLite consensus disorder prediction 1 32 - -
Acco01g2573 1186 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 472 739 IPR023299 GO:0000166
Acco01g2573 1186 Gene3D - 150 319 - -
Acco01g2573 1186 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 68 1164 - -
Acco01g2573 1186 CDD P-type_ATPase_APLT_Dnf-like 94 1044 - -
Acco01g2573 1186 NCBIfam HAD-IC family P-type ATPase 855 970 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco01g2573 1186 NCBIfam HAD-IC family P-type ATPase 396 487 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco01g2573 1186 SUPERFAMILY HAD-like 453 925 IPR036412 -
Acco01g2573 1186 Gene3D - 722 924 IPR023214 -
Acco01g2573 1186 MobiDBLite consensus disorder prediction 1 63 - -
Acco01g2573 1186 FunFam Phospholipid-transporting ATPase 150 319 - -
Acco01g2573 1186 SUPERFAMILY Calcium ATPase, transduction domain A 175 316 IPR008250 -
Acco01g2573 1186 ProSitePatterns E1-E2 ATPases phosphorylation site. 468 474 IPR018303 -
Acco01g2573 1186 Pfam Phospholipid-translocating ATPase N-terminal 78 142 IPR032631 -
Acco01g2573 1186 NCBIfam phospholipid-translocating P-type ATPase 92 1158 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco01g2573 1186 Pfam Cation transport ATPase (P-type) 574 650 - -
Acco01g2573 1186 Gene3D - 571 702 IPR023299 GO:0000166
Acco01g2573 1186 FunFam Phospholipid-transporting ATPase 570 703 - -
Acco01g2573 1186 SFLD Haloacid Dehalogenase 450 935 - -
Acco01g2573 1186 FunFam Phospholipid-transporting ATPase 722 924 - -
Acco01g2573 1186 Pfam Phospholipid-translocating P-type ATPase C-terminal 912 1151 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2573 Acco-ChrAcco01 42760202 42765255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2573 1 1185 Primary Pumps ATPases AT5G04930 69.030 0.0 1709