Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2562 ATGAGCCACATTGTTATATTTCTTCTTGGAGCATCTTTCGCTGCATTAGTTTCAATTCTAGTTTTTTATATCTTCTTTTACCGCAAAAGAAGAACAACCCATGAGATCAAAGACATAGAAAGCCCAGGATTCAAACATGAAGATACAGTGCAGAAAGAGGACTTGGTGATCTTCCAAGGAGGTGAGAACCTCACAATATGTGATATTCTTGATGCTCCAGGGGAAGTAATCGGAAAATCCAATTATAGCACACTTTATAAGGCCTTGTTGCAGCGATGCAATGCAGTAAGACTTCTGAGATTTTTGAGGCCAGTAAGCACTACAAGGGATGAAGAATTGGTTGATGTGATTGGAATGATTGGAGGGATAAGGCATCCCAATTTGGTTCATCTTGTTGGATTTTACACAGGACCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTTTATGGTCATGGGAATCTCACTCAGTTCATAAGAGATGGAAATGGTGAGTCTTACCACTGGACTACAGTATATCGACTAACTGTTGGTATAGCCAAAGGACTAGAGCATCTTCACACTGGACTTGAGAAGCCTATGATCCATGGTAACCTCAAGTCGAAAAACATCCTTCTAGATCGCAATAACCAGCCATGCATCTCGGATTTCGGCCTGCACCTCCTCTTGAACCCCACTTCTGGCCAAGAAATGCTTGAAGCCTCAGCTTCTCAGGGTTACAAGGCACCTGAACTGATTAAAATTAAGGATGTCAGTGAAGAGACCGATATATATAGCCTCGGCGTGATCATGCTCGAGTTGCTTTCAAGGAAGGAGCCTATCAATGAGCATCCAACCCTTGATGAGGATTTCTATTTGCCAAATTTCATGCGAACTGCTGTGCTCGGACATAGAATATCTGACTTGTACCATCCAGACATTCTTCTCAGCAAAAGCAGAGACAATGGAGGCCTGGTTAGCGAAGAATGCATCCTCAAGTATTTTCAACTTGCTATGTCTTGTTGTTCTCCTTCTCCTTCATTGAGACCGAACATAAAGCAAGTCCTTTGGAAGCTTGAAGAGATTATCAAGTAA 1071 0.423 MSHIVIFLLGASFAALVSILVFYIFFYRKRRTTHEIKDIESPGFKHEDTVQKEDLVIFQGGENLTICDILDAPGEVIGKSNYSTLYKALLQRCNAVRLLRFLRPVSTTRDEELVDVIGMIGGIRHPNLVHLVGFYTGPRGEKLLVHPFYGHGNLTQFIRDGNGESYHWTTVYRLTVGIAKGLEHLHTGLEKPMIHGNLKSKNILLDRNNQPCISDFGLHLLLNPTSGQEMLEASASQGYKAPELIKIKDVSEETDIYSLGVIMLELLSRKEPINEHPTLDEDFYLPNFMRTAVLGHRISDLYHPDILLSKSRDNGGLVSEECILKYFQLAMSCCSPSPSLRPNIKQVLWKLEEIIK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2562 356 SUPERFAMILY Protein kinase-like (PK-like) 74 353 IPR011009 -
Acco01g2562 356 Gene3D Phosphorylase Kinase; domain 1 72 148 - -
Acco01g2562 356 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 37 354 - -
Acco01g2562 356 Pfam Protein tyrosine and serine/threonine kinase 75 348 IPR001245 GO:0004672|GO:0006468
Acco01g2562 356 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2562 356 Gene3D Transferase(Phosphotransferase) domain 1 150 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2562 Acco-ChrAcco01 42678831 42680989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2562 30 356 Carbohydrate Esterase AT5G61570 57.692 4.08e-133 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco01g2562 PK_Tyr_Ser-Thr 4e-30 CL0016