Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2560 ATGGTCCGTGCGTCTCTGCTTTCTATTGAATCTGATTGCAAATTGAAGAAAAGTTCAGGCGCACTCTCTTCTCTTGTTTCTTCTTCATCACTTTCTCTTCCAACCATGGCTGCAGAACTTGTTGGCGGTGTTGTTTTGTCCTCCTTCCTTCAAGTGGCTTTTGACAAGTTGGCTTCTCGTGAAATTCTTCACTACTTCCGAAACAAAGGATTGAATGAGGCTTTGGTGAAGAAGCTGAAGATCATGTTGATATCCGTCAACACTGTCATTGATGATGCGGAGTATAAGCAGTTCAGTGATTCAAACGTGAAGGCCTGGCTTTGTGAGCTCAAAGATGCTGTGTACAATGCTGAGGATGTCTTGGATGAGATTAACTGTGAACTCTTCAAACAAAAATTCATTGATGAGGATATTGAATCAAGGTTGAAACAAGTATTTGAAAGCCTAGAATTTCTTGAGGGCAGAAAGATTGCTCTAGGTTTAAAAGAAGGTAAAGGTGGTGTTGTTGGATTTGCCACAAGGTTGCAGACAACTTCCTTGGTCGATGAAGCTGGAATATATGGCAAGAATGAGGACAAAGATAGTATCATTGAATGGTTGCTAAATGACAGTCACTTTTCTGTGACGTCTATAGTGGGTATGGGTGGGTTGGGTAAGACCACCCTTGCTCAGCTTGTTTATAATGATCAAAGGATTCTGAGTGAATTTGATCAAAGAGTTTGGGTATGTGTTTCTGATGACTTTGATGTTTTGAGGTTAACAAAAATAATTTTCAAGAAAACTATTATATCTAATGATGATACGGAAGATTTAGATATTCTTCAAAATAAGTTGAAGGATAAGTTGTCTGGAAAGAAATTCCTCATTGTTCTTGATGATGTTTGGTGTGATGGTTACACATCATGGGAAGCTCTTCTAGCACCTTTCATTTGTGGGGTTGCAGGAAGTAGAATTCTTGTCACTTCACACAATGAGAGTGTTGCTTTAGCTGCCCCGTCCGATAAAACGTCTTGCTCGCATCAATTGTCACACGATGATGGTTGGTCGTTATTTACAAAATATGCATTTTGTAACTATTGTCCTCAAACAAATTCTCATCTTGAAGAAATTGGAAGAAGGATTGTTAAAAAGTGCAAAGGTTTGCCTCTGACCTTGAAAACAATTGGAAGTCTCTTGTATAGAAAATTATCTTGGGAGGAATGGAATGACATTTTGATTAGTGAGATGTGGAACATTTCCTATAATAATATGCTTCCTACTTTGATATTGAGCTATCATTATCTTCCTTCTTATCTTAAGCGATGCTTTGCTTATTAATTTTTTGTGGGCAAATGTAGTGATGAGCTCAACATGAAACAATTAGGTGAACTCAATCTCCACGGTAGATTTTCAATTTATGAGTTGCAGAATGCTCAGGGGATGAATGCCTTAGAGTTAAAAATTCTGAAGGTTTGTTTTTCAGAATTTTTTGTGGGCAAATGTAGTGATGAGCTCAACATGAAACAATTAGGTGAACTCAATCTCCACGGTAGATTTTCAATTTATGAGTTGCAGAATGCTCAGGGGATGAATGCCTTAGAAGCCAACTTGAAAGAAAAAAAGTACCTTGAGGAGTTACGCTTCCAATGGGATGAAAATAAACATGATGATTCTGAGAATGGAAGGGATGTGCTGGAGAAATTGCAACCTCACTATATCTTAAAGACATTGTCAGTCATCTGCTTTGGCGGTACAAGGTTTCCTGATTGTTTTTCTGATAATACACTATCCAACATAGTGTTCCTTCGATTGACAAGTTGCAAGTATTGTTTTGTTTTGCCATCATTAGGCCTTTTGACGTCTCTCAAGCCACTAAACAGTGAAGGGTTGGATGGCATTCGGGCTATTGGTGCTGAACTTTCATCTGCATCTCTTGAATCCTTAGAGCTTGCGGGAATGGTGAATTGGGAGGAATGGGATTGTGTACGAATGCTTCAAGTGCCTTCCTAA 1989 0.3866 MVRASLLSIESDCKLKKSSGALSSLVSSSSLSLPTMAAELVGGVVLSSFLQVAFDKLASREILHYFRNKGLNEALVKKLKIMLISVNTVIDDAEYKQFSDSNVKAWLCELKDAVYNAEDVLDEINCELFKQKFIDEDIESRLKQVFESLEFLEGRKIALGLKEGKGGVVGFATRLQTTSLVDEAGIYGKNEDKDSIIEWLLNDSHFSVTSIVGMGGLGKTTLAQLVYNDQRILSEFDQRVWVCVSDDFDVLRLTKIIFKKTIISNDDTEDLDILQNKLKDKLSGKKFLIVLDDVWCDGYTSWEALLAPFICGVAGSRILVTSHNESVALAAPSDKTSCSHQLSHDDGWSLFTKYAFCNYCPQTNSHLEEIGRRIVKKCKGLPLTLKTIGSLLYRKLSWEEWNDILISEMWNISYNNMLPTLILSYHYLPSYLKRCFAYXFFVGKCSDELNMKQLGELNLHGRFSIYELQNAQGMNALELKILKVCFSEFFVGKCSDELNMKQLGELNLHGRFSIYELQNAQGMNALEANLKEKKYLEELRFQWDENKHDDSENGRDVLEKLQPHYILKTLSVICFGGTRFPDCFSDNTLSNIVFLRLTSCKYCFVLPSLGLLTSLKPLNSEGLDGIRAIGAELSSASLESLELAGMVNWEEWDCVRMLQVPS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2560 662 PRINTS Disease resistance protein signature 378 392 - -
Acco01g2560 662 PRINTS Disease resistance protein signature 281 295 - -
Acco01g2560 662 PRINTS Disease resistance protein signature 208 223 - -
Acco01g2560 662 PRINTS Disease resistance protein signature 587 603 - -
Acco01g2560 662 SUPERFAMILY L domain-like 415 654 - -
Acco01g2560 662 Pfam NB-ARC domain 191 404 IPR002182 GO:0043531
Acco01g2560 662 Gene3D - 171 338 IPR027417 -
Acco01g2560 662 PANTHER DISEASE RESISTANCE PROTEIN RP 450 643 IPR044974 GO:0006952
Acco01g2560 662 Pfam Rx N-terminal domain 45 138 IPR041118 -
Acco01g2560 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 438 IPR027417 -
Acco01g2560 662 Gene3D - 50 157 - -
Acco01g2560 662 FunFam Probable disease resistance protein At1g61300 172 336 - -
Acco01g2560 662 Gene3D - 341 428 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2560 Acco-ChrAcco01 42648328 42651752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2560 181 395 WRKY Transcription Factor Family AT5G45050 27.434 1.27e-07 53.1