Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2513 ATGGAGTCCGATTCGCTAAATTACTGGAGGAACTACTTTCAAACTGCAAATACTGATATATTCGATATTATTGACCACGCAATTATGGTGGCGGCTTCCGATTGTCCGAACGAATTTAGATTACGAAGGGATCGGATTTCGGAACGCTTGTTTTCTTGGAGATCGACTCATTGTGTAGGAGGCTATAGTAAGGAGAGAAAGGAGAAAACTGGTAGGGATGATCTCGAAGAGATGGACACGATCCAAGTTAGTAATTTTAGTTTTGAAGAAGCTGAGGGATTGACTGGCGAGATTGAAAAAGAGTCTAAAATAGTTACGGAGATTTTGAGGATCAAAGAGATTCTCTATAAGGAAGAGGCTGATTCAGTGTTGTTTGAGTCACTGAGGAAGCTGCAGCCGCTCGCACTTACCGTGGACCTTCTTAAGGAAACTGAGATTGGAAAGGCTGTCAATCCTCTCAAGAAGCATGGCTCAAAGGAGATCCGTCAACTCGCACGAACTCTTATTGATTGCTGGAAAGCAATGGTAGATGAATGGATCAACTCGACAAAAGCTATAGAAGCAAAAGGCATCCTAGACTCAATTAGTCTATCCATCCTTAATGAAGGGCAAAGGCTTCATTCTCCTCTGGACGAAGTTGCCATGAGATATAGTAAACTGGTTTACACTGATTCTAGCTCTGGCAGGCAACCGGAATCCGGCTTGCCACAAAAAAGCAACACAGGACCAAAGGTGCAGCAGAAAAAGGAGATTTTTAAGATAAAAAAGAGGCCTCTTGTTGCTCAGCAAGATTGTCAGAAATTCAAGTGTTCAGATGATGTTTCAGTCCAAGCAAAACTAGAAGCCACTAAGAGGAAACTCCACGACTCTTATCAACAAGCCGCAAATGCCAAGAAGCAGCGAACAATACGAGTTATAGAGTTGCATGATCTTCCAAAGCAAGGGAACATTTGCCCCCGAAATCCACACTCCAAGCTTTGGAAGGTTTTGGGACGAAGAAGATAG 1005 0.4299 MESDSLNYWRNYFQTANTDIFDIIDHAIMVAASDCPNEFRLRRDRISERLFSWRSTHCVGGYSKERKEKTGRDDLEEMDTIQVSNFSFEEAEGLTGEIEKESKIVTEILRIKEILYKEEADSVLFESLRKLQPLALTVDLLKETEIGKAVNPLKKHGSKEIRQLARTLIDCWKAMVDEWINSTKAIEAKGILDSISLSILNEGQRLHSPLDEVAMRYSKLVYTDSSSGRQPESGLPQKSNTGPKVQQKKEIFKIKKRPLVAQQDCQKFKCSDDVSVQAKLEATKRKLHDSYQQAANAKKQRTIRVIELHDLPKQGNICPRNPHSKLWKVLGRRR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2513 334 Coils Coil 280 300 - -
Acco01g2513 334 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 97 189 IPR035441 -
Acco01g2513 334 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 104 186 IPR035441 -
Acco01g2513 334 MobiDBLite consensus disorder prediction 224 247 - -
Acco01g2513 334 CDD TFIIS_I 107 177 - -
Acco01g2513 334 SMART TFS2_5 105 178 IPR003617 GO:0005634
Acco01g2513 334 Pfam TFIIS helical bundle-like domain 128 176 IPR017923 -
Acco01g2513 334 ProSiteProfiles TFIIS N-terminal domain profile. 106 179 IPR017923 -
Acco01g2513 334 MobiDBLite consensus disorder prediction 224 246 - -
Acco01g2513 334 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 223 322 IPR044805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2513 Acco-ChrAcco01 42198765 42200669 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Acco01g2513 Med26 4.5e-13 No_clan