Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2510 ATGGCTCTCACTGCTCGCTTTCAAGACTCTCTTACCAGAACTGCACTTCGAGCCTACCTTGCTGAATTCATCTCCACTTTCCTCTATGTCTTCGCCATCATCGGCTCCACTATGTCTTCCAGGAAGATGAAGGGGGAAGCGGCGGCGGAGGCGGCGAGCCTGGTGGGGGAGGCCATAGCGAATAGCTTCGCGTTGTCGACCGCCGTGTTCATGGCGTGGGACGTGTCAGGAGGACATGTGAACCCAGCAGTGACCTTCGCAAGGGTAGTTGGAGGCCATATTACCCTATCAACTGCTTTCTTCTATTGGATCTCTCAGATGATTGCTTCTGTCTTTGCCTGCCTTCTTCTTAAGATCACCTTCGTTGGAATGCATGTGCCAACGTACACAATAGCACCACAAATGACAGGGTTTGGGGCATCAATAGTGGAAGGTGTACTTACATTTGCATTAGTGTACACTGTGTATGCTGCTAGGGACCCTAGGCGTAGTGGTCAACTGGGGTCCACAGGTGCCCTATCCATCGGCTTGATAGCCGGGGCCAATGTCCTAGCCGCCGGTCCTTTCTCCGGTGGGTCAATGAACCCAGCTTGTGCATTTGGCTCAGCCACGGTTGCCGGAACCTTCAAGAACCAAGCAGTGTACTGGGTTGGACCCCTGATTGGCGCCGCCGTTGCTGCTCTTATTTATGACACCGCAGGCTATCCTTCTCCGAATACCGATTCGTTTGTAGAAGTAGATAGGGTTTGA 750 0.528 MALTARFQDSLTRTALRAYLAEFISTFLYVFAIIGSTMSSRKMKGEAAAEAASLVGEAIANSFALSTAVFMAWDVSGGHVNPAVTFARVVGGHITLSTAFFYWISQMIASVFACLLLKITFVGMHVPTYTIAPQMTGFGASIVEGVLTFALVYTVYAARDPRRSGQLGSTGALSIGLIAGANVLAAGPFSGGSMNPACAFGSATVAGTFKNQAVYWVGPLIGAAVAALIYDTAGYPSPNTDSFVEVDRV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2510 249 ProSitePatterns MIP family signature. 79 87 IPR022357 -
Acco01g2510 249 SUPERFAMILY Aquaporin-like 11 237 IPR023271 -
Acco01g2510 249 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g2510 249 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g2510 249 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g2510 249 PRINTS Major intrinsic protein family signature 17 36 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g2510 249 PRINTS Major intrinsic protein family signature 61 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g2510 249 PRINTS Major intrinsic protein family signature 213 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g2510 249 PANTHER AQUAPORIN-8 7 233 IPR034294 -
Acco01g2510 249 Pfam Major intrinsic protein 14 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g2510 249 Gene3D Glycerol uptake facilitator protein. 2 240 IPR023271 -
Acco01g2510 249 FunFam Probable aquaporin TIP5-1 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2510 Acco-ChrAcco01 42184408 42186020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2510 2 248 Major Intrinsic Protein MIP AT3G47440 60.887 6.67e-101 292