Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2509 ATGGAGTATTTGGAGAGACGCTTATCAGCGTTGAAACCGAATCATGTATATATCAGCTTTGACGACGACGACGGCACTCGCAAATTCGTCCGAAGCCTTTCGGCTGCTCTTAAAGCACAAGGCTTCAGAATCTTCGGACATTATGAGAAGCGTGAAACAGGAGTCTCCAATAATCTTCAATATGACCAATTTCTTAAAGCAATTGAAAAGTCCTGGATTAGGATTATTGTGTTCTCCAAAAACTATGCTTCTTCTTCTTGGTGTTTGCGGGAACTAGAGGGGTTTGCCCTATCCATGGTTCCCAAACTCAATCGAGCACCAGGTTCAATGTTTGCAGAACTTGAAATAACACCTCAACTCTCTCTTCGGCCTGAAGAACGTGAAAGGGTTGAAGAACTTGAAACAAGTTTCGAAGCAGACATAGACAAGGTGAACAGATGGAGGCGAGCTCTGAAAAACGGCTCTCATCTCTCCGGCAGCAGAGAAAGGACGATAGCAGTTTATTACGATGTAGATCCTAATTCCTTTCCTCAACAAGCATACCTGGAACATTCATCTGAGGAACGCCAACGGAGGCTGGAGGCTGTCAAACAAGTGACCTCTCTCTCTGGCTGGCCCGTACGGAATTATTCATCAGGGACACAAGTTACTCAAAAGATTGTTAAAGAAGTCAAGTCAAGAATAGATCAACAATTTTATGACTTTTTCGGATTTGTTGGGATACAGTCTCAAGTGGAAGAAGTAGAAAAGCTTTTGGATTTGAGTACAGACGATGAAGTTCTAGTTGTTGGCATTTGTGGTATGGCAGGATTAGGGAAGTCTACTATTGCTGCAGTTTTATATCTTAAGATCTTTCACTGTTTTGATGGCTTTTGTTTCCTTCCCAATGTAAGTGCACGCTTAAGGCAAGGTGACTTATCCCTACAAGAATTTCTTCGTAGAAATTTTGAGGCGGAAAATTCAGAGGTAAGGCATATTCTACGCCAAGATTTCTTAGCACGCAAAAGGTTAAGAAAGCACAAGTCTCTCATAGTTCTTGATGGTGTCGATCTTGCACAACATCTACAAGAGTTGAATTTAGTTGAAAAATCTAACTGTTTTGGCGTTGGGAGTAGAATCATTATAACAACTAGAGATGAACAAGTTCTTCAAGAATATGAGGTTGATAGAGTTTATAGGCCCAAACTTTTGCTCAAGGATGAAGCTTTCAAACTTTTTTGTTCTACAGCTTTTCCAAAGGAATATCCCACCGAAGACTTCGAAGAGATGATAGATAGGGTATTGGACTATGCTGATGGCCTTCCACTAGCAATTGAAGTTTTGGGTTCATCCTTTTATGGAAAAGGCATCGCAGAATGGATAAATTTCCTGGATAGAGAAGAAATTGTACCTCCCAATGAGATCATAATGGTGATTAGAAAAAGTTTTGATGAGCTTGATGACATGACTAAGGAAATGTTTTTGGACGTAGCATGTTTCTTTGTAGGGAAGGACATTAATTATGTGAAGGAAATTTTACATGATTGCTTCAGTTGCTGTGTTGATAAAGGAATCAGACTTCTTATTCAAAAATCAATTATCACAATTGCAAATCAGAGGATACAAATGCATGGCATGTTGCAAGCAGTGGGACGAGAACTTGTTCGACGAGAAAGTCCAAATCAGCCTGAACTACGACGTCGATTATACCTTTATAGTGACATCAAACATGTTATGGAGAGAGAAAGAAACACGGTGATCGATGATGTTGAAGCTATAGTCTTAGATTTGGAAGAGCCAAAAACGACTAAATTGAGGATTGATGCTTTATCATATATAATCAACCTTAGATTGCTCATATTTCGTAATGTGAAATGTTTTGGAACTCTCGTTAATCTTTCAAGCGAATTGCAATATGTTTCGTGGCATCAATATCCTTTCACTGGTTTACCATCGAGTTTTCAGTCTGATGTACTAGTTCAATTGATCATGCCTGAAAGCAACCTGACAGAAGTATGGAAGGGCAGGATGATGCTCCCTAAGTTGAGAAAAATGAATTTATGTGGCTCCAAAACTTTGACAAAGACGCCAGATTTTGGAGGGGTTCCGAATCTTGAGAGGCTAGAGCTTGAAGGATGCACTGGATTATTGCAAATTGATCCATCTATTTCTAAACTTTCAAAGCTCAAATTATTGAATTTGAGAAAGTGCATCAATCTTGTTAGTATCCCTAATTCCTTGTTTTCTCATCACAACTCGTTGGAAGTCCTCAATCTAGCTGGCTGCTCTAAACTTGCATATTGCTTGAAGTTTTCTCCTGTGAAGAGTTTGGTACATATGAAACTGCTTAGCATTTGGTATAATCCATTTTTAGAAACATTGTTCTTCTTTCTTCGGTTGGTTTTACCGGAACAAAAAAGTTATCATGACTTTGTTTGTTGTTGTCTTATTTATTTGATGTGTATTTGTGAGGTCGCATAG 2460 0.3907 MEYLERRLSALKPNHVYISFDDDDGTRKFVRSLSAALKAQGFRIFGHYEKRETGVSNNLQYDQFLKAIEKSWIRIIVFSKNYASSSWCLRELEGFALSMVPKLNRAPGSMFAELEITPQLSLRPEERERVEELETSFEADIDKVNRWRRALKNGSHLSGSRERTIAVYYDVDPNSFPQQAYLEHSSEERQRRLEAVKQVTSLSGWPVRNYSSGTQVTQKIVKEVKSRIDQQFYDFFGFVGIQSQVEEVEKLLDLSTDDEVLVVGICGMAGLGKSTIAAVLYLKIFHCFDGFCFLPNVSARLRQGDLSLQEFLRRNFEAENSEVRHILRQDFLARKRLRKHKSLIVLDGVDLAQHLQELNLVEKSNCFGVGSRIIITTRDEQVLQEYEVDRVYRPKLLLKDEAFKLFCSTAFPKEYPTEDFEEMIDRVLDYADGLPLAIEVLGSSFYGKGIAEWINFLDREEIVPPNEIIMVIRKSFDELDDMTKEMFLDVACFFVGKDINYVKEILHDCFSCCVDKGIRLLIQKSIITIANQRIQMHGMLQAVGRELVRRESPNQPELRRRLYLYSDIKHVMERERNTVIDDVEAIVLDLEEPKTTKLRIDALSYIINLRLLIFRNVKCFGTLVNLSSELQYVSWHQYPFTGLPSSFQSDVLVQLIMPESNLTEVWKGRMMLPKLRKMNLCGSKTLTKTPDFGGVPNLERLELEGCTGLLQIDPSISKLSKLKLLNLRKCINLVSIPNSLFSHHNSLEVLNLAGCSKLAYCLKFSPVKSLVHMKLLSIWYNPFLETLFFFLRLVLPEQKSYHDFVCCCLIYLMCICEVA 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2509 819 Gene3D Ribonuclease Inhibitor 565 795 IPR032675 -
Acco01g2509 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 489 IPR027417 -
Acco01g2509 819 Pfam NB-ARC domain 242 453 IPR002182 GO:0043531
Acco01g2509 819 Gene3D - 397 480 IPR042197 -
Acco01g2509 819 PRINTS Disease resistance protein signature 262 277 - -
Acco01g2509 819 PRINTS Disease resistance protein signature 431 445 - -
Acco01g2509 819 PRINTS Disease resistance protein signature 717 733 - -
Acco01g2509 819 PRINTS Disease resistance protein signature 336 350 - -
Acco01g2509 819 Gene3D - 234 391 IPR027417 -
Acco01g2509 819 SMART till_3 13 157 IPR000157 GO:0007165
Acco01g2509 819 Pfam TIR domain 15 155 IPR000157 GO:0007165
Acco01g2509 819 SUPERFAMILY L domain-like 586 789 - -
Acco01g2509 819 ProSiteProfiles TIR domain profile. 12 185 IPR000157 GO:0007165
Acco01g2509 819 Gene3D - 163 230 IPR035897 -
Acco01g2509 819 Gene3D - 10 162 IPR035897 -
Acco01g2509 819 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 760 IPR044974 GO:0006952
Acco01g2509 819 SUPERFAMILY "Winged helix" DNA-binding domain 466 572 IPR036390 -
Acco01g2509 819 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2509 Acco-ChrAcco01 42180626 42183835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2509 239 754 WRKY Transcription Factor Family AT5G45050 32.110 1.51e-67 242