Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2506 ATGGAGTATTTCGAGAGCTGCTCATCATCGTTGAAGCCGAGTCATGTGTATATAAGCTTTCGAGGCGATGAAGACACTCGTAAATTCATGCATAGCTTTTCGGCTGCTCTTAAAGCACAAGGCTTCAGAATCTTTGGAGATGACAAGAGGCGTGAGACGCCTGACTCCTATCTTCCGCAGCACCTTCGTCGAGCAATTCGTGAGTCGTGGATTTGATATCCCGGTGAAGATCCATTGTATTACGAAGGAGAAGAAATGTACGAAGCAAACATGGAAAAGGTGGACAGATGGAAACGAGCTATGAAAGAAGGGTTAGGTCTCCCTTGCAGGTGGAGTGATAAGGTCATAGCAGTTTATTACGATGTAGATCCTAAATCCTTTCCTCAACATATTCAACAATCAAAAGACCTACGTTTTTTCAATAGAAGGTTGATCAGTAGGCTTATCGAAGACGTGGCCAGTTTCCCTGGCTGGGACGTACGGAACGACTCAGGGCCACAAGCTATTCAGAGAATTGTAAAACAAGTCAAGTCAAGAATAGATCAAAGATTTTATGACTTTTTCGGATTTGTTGGGATACAATCTCAAGTGGAAGAAGTAGAAAAGCTTTTGGATTTGAGTAAGGATGATGAAGTGCGAGTTGTTGGCATTTGTGGTATGTCAGGATTGGGGAAGTCTACTATTGCTAGAGTTTTATATTTTAAGATCATTCATTATTTTGATGCCTTTTGTTTCGTTCCCAATGTAAGTGCACAATTAAAGGAAGGTGACATATCTCTACAACAGCTTCTTCGTAGATATATGGAGACGGAAAATTCAGAGATAAGGGATATTGTTGGCCAAGAGTTCTTAGCATGCAAAATGTTAAGAAAGCACAAATTTCTCATAGTTCTTGACGGTGTCGATCTTGTGAAAGATATTGAAGAATTGAACTTGACTGAAAAATATGATTGTTTTGGTGGGGTCAGTGGAATCATTCTTACGACTAGAGATGAACAAGTCCTTCAAAAATATGAGGTTGATATCATTTATAGACCTAAACTTTTGTCTGAGGATGAAGCTTTCGAACTATTTTGTTCTAAAGCCTTTCCAAAGGAGTATCCTGTTAGTGATTTCAAAGGGTTGATAGATAGGGTATTGGAATATGCTAATGGCCTTCCATTGGCAATTGAAAAATTGGGTTCATCCTTTTATGGAAAAGGCATTGCAGAATGGAGAAGTCTCCTGGATAGAGAGGAAATTATTCCTCCCCGTGTGCTCATAATGTTGCTCAGAAAAAGTTTTGATGAACTTGATGACTTGAGTCAGGAAATGTTTTTGGACATAGCATGTTTCTTTGTAGAGAAGGACATTAATTATGTGAAGGAAATTTTGCATGATCGTATCAGTTTCCGTGTTGATACAGAACTTCTTGTTCAAAAATCACTTATCACAATTGCAAATCAGAAGATACAGATGCATCGTATGTTGCAAGCAATGGGACGAGAAATTGTTCGACAACGATGTCCAAATCAGCCAGATAAACGAAGTCGATTATACCTTTATAGTGACATCAAACATGTTATGGAGAAAGAAAGAAACAAGGTGATAACTGATGTTGAAGCTATAGCCTTGGACTTGGAAGAGCATAACATGGCAACATTGAGGATTGATGCTTTATCAGATATGATCAACCTTAGATTGCTCATATTTCGTAATGTGAAATGTTTTGGAACTCTCATGCTCCCTAAGTTGAGAAAAATGAATTTATGTGGCTCGAAAACTTTGACAAAGACGCTAGATTTTGGAGGGGTTCCGAATCTTGAGAGAGTAGAGCTTGAAGGATGCACTGGATTATTGCAACTTGACCCATCTATTGCTAAACTTTCAAAGCTCAAATTCTTGAATTTGAGGAATTGCATCAATCTTATTAGTATCCCTAATTCCTTGTTTTCCTACAACTCGTTGGAAGTCCTAAATCTGGCTGGCTGCTCTAAACTTACATATTGCTTGAAGTTTTCTCCTGGGAAGAGCCTGATACTTGTGAAACTGCTTAGCATTTGGGATAGTCCATTCTTAGAAACATTGTTGTGCTTTTTTCTGTTGGTTTTACCAGAACAAAAAAGTTATCATGACTTTGTCTTTTGTTGTCTTATTTATTTGATGTGTATTTGTGATGTCGCATAG 2166 0.3837 MEYFESCSSSLKPSHVYISFRGDEDTRKFMHSFSAALKAQGFRIFGDDKRRETPDSYLPQHLRRAIRESWIXYPGEDPLYYEGEEMYEANMEKVDRWKRAMKEGLGLPCRWSDKVIAVYYDVDPKSFPQHIQQSKDLRFFNRRLISRLIEDVASFPGWDVRNDSGPQAIQRIVKQVKSRIDQRFYDFFGFVGIQSQVEEVEKLLDLSKDDEVRVVGICGMSGLGKSTIARVLYFKIIHYFDAFCFVPNVSAQLKEGDISLQQLLRRYMETENSEIRDIVGQEFLACKMLRKHKFLIVLDGVDLVKDIEELNLTEKYDCFGGVSGIILTTRDEQVLQKYEVDIIYRPKLLSEDEAFELFCSKAFPKEYPVSDFKGLIDRVLEYANGLPLAIEKLGSSFYGKGIAEWRSLLDREEIIPPRVLIMLLRKSFDELDDLSQEMFLDIACFFVEKDINYVKEILHDRISFRVDTELLVQKSLITIANQKIQMHRMLQAMGREIVRQRCPNQPDKRSRLYLYSDIKHVMEKERNKVITDVEAIALDLEEHNMATLRIDALSDMINLRLLIFRNVKCFGTLMLPKLRKMNLCGSKTLTKTLDFGGVPNLERVELEGCTGLLQLDPSIAKLSKLKFLNLRNCINLISIPNSLFSYNSLEVLNLAGCSKLTYCLKFSPGKSLILVKLLSIWDSPFLETLLCFFLLVLPEQKSYHDFVFCCLIYLMCICDVA 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2506 721 Gene3D - 7 178 IPR035897 -
Acco01g2506 721 Gene3D - 349 438 IPR042197 -
Acco01g2506 721 ProSiteProfiles TIR domain profile. 12 180 IPR000157 GO:0007165
Acco01g2506 721 Pfam NB-ARC domain 195 408 IPR002182 GO:0043531
Acco01g2506 721 PRINTS Disease resistance protein signature 288 302 - -
Acco01g2506 721 PRINTS Disease resistance protein signature 620 636 - -
Acco01g2506 721 PRINTS Disease resistance protein signature 214 229 - -
Acco01g2506 721 PRINTS Disease resistance protein signature 383 397 - -
Acco01g2506 721 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 71 IPR035897 -
Acco01g2506 721 SUPERFAMILY L domain-like 486 683 - -
Acco01g2506 721 Gene3D Ribonuclease Inhibitor 507 700 IPR032675 -
Acco01g2506 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
Acco01g2506 721 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 662 IPR044974 GO:0006952
Acco01g2506 721 Gene3D - 179 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2506 Acco-ChrAcco01 42149320 42152422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2506 191 656 WRKY Transcription Factor Family AT5G45050 29.664 2.75e-50 188