Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2505 ATGGAGAATGTCATTAGTGGATCATCATCATCGTCAAGACCCATTCATGTTTATCTAAGTTTCAAAGGAGATGACAAAACATGCAGATTCACAGATAGGCTTTGGGCTACTCTTGAAAGTAATGATTTGAACACCTTTTGGGATGACAAGAAGCATCATGACTCAGTCGACTCCGTCTTTTTTCCTCGCCACTTTCTCAAAGCAATTCGACAATCCAACATTTCAATTGTTGTCTTCTCCAAGAACTTTGCTTCTTCCATATGGTGCCTTGAGGAGCTCTCAGAGATCGCTGCTCGCATTCATGAACCTCGATATGCTGTTTTCCCTATTTTCTATGATGTAGACCTATCTGAGGTTCAAAACCAAACTAATTCTTTTGAAAAAGCTTTTGCTGAACATGAACAAAGGTTCACAGCAAATTTACGCAAGATCCGCAGCTGGAGGTTAGCAACAACGCAAGTGGCCAATCTCTTTGGTTGGCACGTACCATCCGAGCCAGAGCCACAAGTTATTGATGACATCATTAAGGAGGTCAAGAGAAAAATGCATGAATTAATGTATGCTGATGCAGACTTAGTAGGGATGCAATCTAGAGTAAGAGAAGTAGAAGAGCTTCTTGATTTGGGTTCAAATGATGAAATTAGAGTTGTGGGTATTTGTGGTATGGGTGGGATAGGGAAGTCAACTCTTGCCAGAGTTGTGTATGATAGGATCTCTCACCATTTTGATGCTTCTTATTTGGTACTCAATTCAAGTGAATTTTTTGAGACCACAGGGCTAAGACATCACAAGAGAACTCTCATCATTTTTGATTGTGTCGATATTTTTAAAGTTATTATACGATCACTAATCATTGCTCTAAGAGAAAGCCAGTTTGGTGCGGGGAGTAGAATAATCATAACGACTAGAGATGAAGGAGGGCTTAAAATGTTTGAGAAGCATCATATTTATAGGGTTACATTATTGAACAAGGACGAAGCTCTTCAATTATTGTGTAGAAGAGCTTTCAAATCTGATTTTCCAATGAGAGGTTACGAGGAGCAAATAGACCGAGTACTGCAATATGCTAGTGGCCTTCCATTGGCAATTGTAGTACTCAGCCAATTCTTATATAATAGAAGAGCTTCTGAATGGAGCAGTGCCTTTGTTGAATTAAAAAAGGTTGCTAATTCTATGATAATGAAGGCTATTCTTGAAGTTAAAGCAATAGTTTTGGAACCAAAAGATTTACAAAGGAGTACGTTGAGGGTTGAAGGATTATCACGCATGAACTATCTTAGACTTCTAATATTTCGCAATGTGAAATTTTCTGGAGTCCTGCATCATCTTTCAAGCGATATCCGATATATTTCATGGCACCAATACCCTTTCACTTCTTTGCCATTAAGCTTTGTACCATCTCGTCTCACGGGATTGATTTTGCCTGATAGCTGCATCACAAATTTATGGGATGAAGAAAAGCAATTCCCTCGCTTGAGAAACTTGAATCTCAGCGGCTCCAAAGATTTAACCAAAGTGCCAAGTTTCAGCGCATTTCCAAGTCTTGAGAGGCTAGATCTTGAAGGATGCACTAAATTATCACAGTTTGGTTGTTCTTTTCATCCTCTTAAACTCAAATTCTTAAATTTGAGAAATTGTTCTAATATTGTCAGTATTTCCAATTTGTTGTTTTCTCTAAGCTCCTTAGAAATGCTAAATTTGGCTGGTTGTTTCAAATTTGCTTATTGTCTGTCGTTTTCTCCTATTGAGGAGATTGGCGGAAAATTTGAAGAAACCATTGAGGAATCATCTTCCAGGAAGAGACAAAAGCTATCTTTTTCATTGACGAGAAGGCCAAAGCCACAAGCTATTGATGACATCATTAAGGAGGTCAAGAGAAAAATGCGTGAATTAGTCTATACTGATATAGACCTTGTAGGAAGGAATGAAATATCGAGTCAAAGAAGTAGAAAAGCTTTTGGATTTGGATTCGAGCGATGA 1980 0.3828 MENVISGSSSSSRPIHVYLSFKGDDKTCRFTDRLWATLESNDLNTFWDDKKHHDSVDSVFFPRHFLKAIRQSNISIVVFSKNFASSIWCLEELSEIAARIHEPRYAVFPIFYDVDLSEVQNQTNSFEKAFAEHEQRFTANLRKIRSWRLATTQVANLFGWHVPSEPEPQVIDDIIKEVKRKMHELMYADADLVGMQSRVREVEELLDLGSNDEIRVVGICGMGGIGKSTLARVVYDRISHHFDASYLVLNSSEFFETTGLRHHKRTLIIFDCVDIFKVIIRSLIIALRESQFGAGSRIIITTRDEGGLKMFEKHHIYRVTLLNKDEALQLLCRRAFKSDFPMRGYEEQIDRVLQYASGLPLAIVVLSQFLYNRRASEWSSAFVELKKVANSMIMKAILEVKAIVLEPKDLQRSTLRVEGLSRMNYLRLLIFRNVKFSGVLHHLSSDIRYISWHQYPFTSLPLSFVPSRLTGLILPDSCITNLWDEEKQFPRLRNLNLSGSKDLTKVPSFSAFPSLERLDLEGCTKLSQFGCSFHPLKLKFLNLRNCSNIVSISNLLFSLSSLEMLNLAGCFKFAYCLSFSPIEEIGGKFEETIEESSSRKRQKLSFSLTRRPKPQAIDDIIKEVKRKMRELVYTDIDLVGRNEISSQRSRKAFGFGFER 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2505 659 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 160 IPR035897 -
Acco01g2505 659 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 411 573 IPR044974 GO:0006952
Acco01g2505 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 389 IPR027417 -
Acco01g2505 659 Coils Coil 116 136 - -
Acco01g2505 659 ProSiteProfiles TIR domain profile. 13 182 IPR000157 GO:0007165
Acco01g2505 659 Pfam NB-ARC domain 263 387 IPR002182 GO:0043531
Acco01g2505 659 Pfam NB-ARC domain 198 253 IPR002182 GO:0043531
Acco01g2505 659 Gene3D - 181 262 IPR027417 -
Acco01g2505 659 Pfam TIR domain 16 182 IPR000157 GO:0007165
Acco01g2505 659 SUPERFAMILY L domain-like 415 573 - -
Acco01g2505 659 Gene3D Ribonuclease Inhibitor 402 582 IPR032675 -
Acco01g2505 659 PRINTS Disease resistance protein signature 510 526 - -
Acco01g2505 659 PRINTS Disease resistance protein signature 216 231 - -
Acco01g2505 659 PRINTS Disease resistance protein signature 356 370 - -
Acco01g2505 659 Gene3D - 8 180 IPR035897 -
Acco01g2505 659 SMART till_3 14 157 IPR000157 GO:0007165
Acco01g2505 659 Gene3D - 321 401 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2505 Acco-ChrAcco01 42136763 42140922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2505 422 596 WRKY Transcription Factor Family AT4G12020 37.949 1.45e-22 101