Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2504 ATGCCTAAAGACGAAACAAACTTGATTGATTTGGCGTTTCATTTTCTCTTTTTCAGCTCAGGGCCACAAGCTATTCAAAGAATTGTAAAACAAGTCAAGTCAAGAATAGATCAAAGATTTTATGACTTTTTCGGATTTGTTGGGATACAATCTCAAGTGGAAGAAGTAGAAAAGCTTTTGGATTTGAGTAAGGATGATGAAGTGCGAGTTGTTGGCATTTGTGGTATGTCAGGATTGGGGAAGTCTACTATTGCTAGAGTTTTATATTTTAAGATCATTCACTATTTTGATGCCTTTTGTTTCGTTCCCAATGTAAGTGCATATTTAAAGGAAGGTGAATCTCTACAGCAACTTCTTCGTAGATATTTGGAGACGGAAAATTCAGAGATAAGGGATATTGTTAGCCAAGAGTTCTTAGCATGCAAAATGTTATTAGAGCACAAATTTCTTATAGTTCTTGACGGTGTGGATCTTGTGCAAGATATTGAAGAATTGAACTTGATCGAAAAATCTGATTGTTTTGGCGGGGGTAGTAGAATCATTCTAACAACTAGAGATGAACAAGTCCTTCAAAAATATGAGGTTGATATCATTTATAGACCTAAACTTTTGTCTGAGGATGAAGCTTTCGAACTATTTCGTTCCAAAGCCTTTCCAAGGGAGTATCCTGTTAGTGATTTCAAAGAGTTGATAGATAGGGTATTGGAATATGCTAATGGCCTTCCGTTAGCAATTGAAAAACTGGGTTCATCCTTTTTTGGAAAAGGCATTGCAGAATGGAGAAGTCTCCTGGATAGAGAGGAAATTATTCCTCCCCATGTGCTCATAATGTTGCTCAGAAAAAGTTTTGATGAACTTGATGACTTGAGTCAGGAAATGTTTTTGGACATAGCATGTTTCTTTGTAGAGAAGGACATTAATTATGTGAAGGAAATTTTGCATGATTGTATCAGTTTCCGTGTTGATACAGAACTTCTTGTTCAAAAATCACTTATCACAATTGCAAATCAGAAGATACAGATGCATCGTATGTTGCAATCAATGGGACGAGAAATTATTCGACAACGATGTCCAAATCAGCCAGATAAACGAAGTCGATTGTACCTTTATAGTGACATCAAACATGTTATGGAGAAAGAAAGAAACACGGTGATAACTGATGTTGAAGCTATAGCCTTGGACTTGGAAGATCATAAAATGGCTACGTTGAGGATTGATGCTTTATCAGATATGATCAACCTAAGATTGCTCATTCTTCATAATGTGAAATCTTTTGGAACGCTAGAAAATCTTTCAAGTGAGTTGCGATATGTTTCGTGGCATCAATATCCTTTCATTGGTTTACCATCGAGATTTCAGTCTGATACATTAGTTCAATTGATTATGCCTGAAAGCAACATGATAGAAGTATGGAAAGGCAAAATGATGCTCCCTAAGTTGAGAAAAATGAATTTATGTGGCTCAAAAACTTTGATAAAGACGCCAGATTTTGGAGGGGTTCCGAATCTTGAGAGGGTAGAGCTTGAAGGGTGCACTGGATTATTGCAACTTGACCCATCTATTGCTAAACTTTCAAAGCTCAAATTCTTGAATTTGAGGAATTGCATCAATCTTATTAGTATCCCTAATTCCTTGTTTTCCTACAACTCGTTGGAAGTCCTAAATCTGGCTGGCTGCTCTAAACTTGCATATTGCTTGAAGTTTTCTCCTGGGAAGAGCCTGATACTTGTGAAACTGCTTAGCATTTGGGATAGTCCATTCTTAGAAACATTGTTGTGCTTTTTTCTGTTGGTTTTACCAGAACAAAAAAGTTATCATGACTTTGTCTTTTGTTGTCTTTTTTATTTGATGTGTATTTGTGAGGTCGCATAG 1872 0.3638 MPKDETNLIDLAFHFLFFSSGPQAIQRIVKQVKSRIDQRFYDFFGFVGIQSQVEEVEKLLDLSKDDEVRVVGICGMSGLGKSTIARVLYFKIIHYFDAFCFVPNVSAYLKEGESLQQLLRRYLETENSEIRDIVSQEFLACKMLLEHKFLIVLDGVDLVQDIEELNLIEKSDCFGGGSRIILTTRDEQVLQKYEVDIIYRPKLLSEDEAFELFRSKAFPREYPVSDFKELIDRVLEYANGLPLAIEKLGSSFFGKGIAEWRSLLDREEIIPPHVLIMLLRKSFDELDDLSQEMFLDIACFFVEKDINYVKEILHDCISFRVDTELLVQKSLITIANQKIQMHRMLQSMGREIIRQRCPNQPDKRSRLYLYSDIKHVMEKERNTVITDVEAIALDLEDHKMATLRIDALSDMINLRLLILHNVKSFGTLENLSSELRYVSWHQYPFIGLPSRFQSDTLVQLIMPESNMIEVWKGKMMLPKLRKMNLCGSKTLIKTPDFGGVPNLERVELEGCTGLLQLDPSIAKLSKLKFLNLRNCINLISIPNSLFSYNSLEVLNLAGCSKLAYCLKFSPGKSLILVKLLSIWDSPFLETLLCFFLLVLPEQKSYHDFVFCCLFYLMCICEVA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2504 623 Pfam NB-ARC domain 51 263 IPR002182 GO:0043531
Acco01g2504 623 SUPERFAMILY L domain-like 392 586 - -
Acco01g2504 623 PRINTS Disease resistance protein signature 522 538 - -
Acco01g2504 623 PRINTS Disease resistance protein signature 143 157 - -
Acco01g2504 623 PRINTS Disease resistance protein signature 70 85 - -
Acco01g2504 623 PRINTS Disease resistance protein signature 238 252 - -
Acco01g2504 623 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 565 IPR044974 GO:0006952
Acco01g2504 623 Gene3D - 32 198 IPR027417 -
Acco01g2504 623 Gene3D - 203 287 IPR042197 -
Acco01g2504 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 297 IPR027417 -
Acco01g2504 623 SUPERFAMILY "Winged helix" DNA-binding domain 277 377 IPR036390 -
Acco01g2504 623 Gene3D Ribonuclease Inhibitor 381 575 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2504 Acco-ChrAcco01 42129672 42131766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2504 491 595 WRKY Transcription Factor Family AT5G45050 34.906 5.00e-06 48.1