Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2494 ATGAAATCTTTTCTTCTCTTTCTCACATTCTCCTTCTTCTGCCAAATATACCTAGCGTTCTCTGCTTCTTCAACTCCACCCATCCAACTCATCTCTCTGCTTTCACTAAAATCTTCCTTCAAAGACCCTCTAAATAAACTCCATGACTGGGACCCTTCTTCTACCTTCTCAAATTCTAATTTCCAGGACCCTTTTTGGTGTTCATGGTCAGGCATCACATGCCATTCAAAAACAGCTCAAATCACCTCCATTGACGTCTCTAATCGCAACCTTTCAGGCACAGTTTCACCGGAAATAAGGTATTTGACTACCTTAAACCACTTGAATATAAGTGGGAATGGCTTCAGCGGAAGTTTCCAAGCAGCATTTTTTGAACTCACTGAGCTGAGGACTCTGGATATCAGCCACAACTCCTTCAACTCAACTTTCCCACCAGGGATTTCAAAGCTCAAGTTCTTGAGAATCTTCAATGCTTACAGCAACAACTTCGTTGGCCCTTTACCTCAAGAATTCATCAGACTCAGGTTTCTTGAGCAGCTCAACCTTGGTGGGAGCTACTTCAGCGACAGGATTCCTTCAGCTTACGGCAGCTTCCCACGATTGAAGGTTCTTCATTTGGCTGGAAATGTGTTGGAAGGTCCAATACCACCTCAGTTAGGCTTCTTATCACAGCTTGAACGCTTGGAAATTGGATACAACCAGTTTTCTGGAGGAATACCAGAGGAATTCACTTCTTTGGCTAGTCTAAAATACTTAGATATCTCTTCTGCTAATCTTTCTGGTCCTGTGACTCCACAACTAGGAAACTTGACCATGCTGGAAACGCTGCTGCTCTTCAAGAATCGGTTCACAGGGGAAATCCCGCCAAGTTTAGGCAATTTGAAAGCACTCACGGCTCTTGATTTGTCAGATAATGAGCTCACTGGGTCTATCCCTGAAGAAGTTGGATTGTTGAAGGAACTTAACATCTTGAGCTTAATGGAGAACAAGATGACGGGTGAAATACCTCAAGGGATTGGTGAACTTCCCTACCTCGATACTTTGCAATTATTTAACAACTCTCTTACTGGGATTCTCCCACCTATGCTTGGTTCAAATGGTTTACTCCAGAGACTAGATGTTTCCACCAATTCACTTTCTGGTCCTATCCCACCACGTGTTTGCAAAGGAAACAAGCTCATTAAGCTCATACTCTTCCGCAACAAATTTGAGGGTGCAATTCCTGAATCACTCGTGAACTGTACTTCACTAACGAGGGCTAGAATCCATAACAACCAACTCAATGGTTCGATTCCATCAGGTTTTGGTCTGCTCCCAAACCTGACCTTCGTTGATATGAGCAACAACAACTTTGTAGGTCAAATTCCTGAAGATTTTGGCAATGCAGTTAAAATACAGTACTTGAACCTCTCTGGAAATTCTTTCGAAAGCCGATTACCACGTAACATCTGGAACGCTTCCAATCTACAGATTTTCTCCGCAAGTTCATCAAAAATAATTGGCGAAATCCCAGATTTCATCGGGTGCCAGAACATCTACAGAATCGAATTGCATGGAAACTCTCTGAATGGCACCATCCCTTGGGACATCGGCCACTGCGAGAAGCTCCTTCAATTGAATCTGAGCCACAATTCCCTCACAGGTATAATCCCTTGGGAAATCTCTGCTCTTCCGTCCATCACGGACGTCGATCTCTCACATAACTTTCTCACCGGTACCATACCTTCCAATTTCAACAATTGTACAACCTTAGAAAACTTCAATGTCAGTTACAACCTCCTCACCGGACCAATTCCCTCGGCGGGATCAACTTTCCACCCATCATCATTCACCGGCAACGAAGGCCTTTGCGGCGGCATTCTGGCAAAACCGTGCGCGGCGGACGCAGAAGCCCTCGCTGCAAGCAGTGATGTCGAGCTTCACAACAAACAACAGCCCAAGAAAACCGCCGGCGCCATCGTGTGGATCGTCACGGCGGCATTTGGAATCGGTCTTTTCGCCCTCGTCGCCGGCACACGCTGCTTCCGCGCAAACTACGGTGGATCATTCAGCGGCGGCGATGACCACCGCGATGTCGGGCCGTGGACACTTACGGCGTTCCAGCGTTTGAATTTCACGGCGGAGGATGTGATCGAGTGTTTGTCGATGTCCAACAAGATCCTAGGGATGGGGTCCACAGGAACGGTATATAAAGTAGAAATGCCAGGTGGCGAGATCGTAGCCGTTAAAAAGCTATGGGGAAAGCATAAGGAGAACAGCAACATAATCCGACGGCGGAGAGGGGTCCTAGCGGAGGTTGAAGTGTTGGGGAACGTTAGGCATAGGAACATAGTGAGATTGTTAGGGTGTTGCAGCAACAGGGAGTGCACGATGCTGCTCTACGAGTACATGCCCAATGGGAATTTAGATGATTTATTGCATGGGAAAAATAAGGGAAATAATTGTAATAATCTGGCCGCTGATTGGTTAACAAGGTATAAGATAGCCTTGGGGGTGGCTCAAGGGATTTGCTACCTTCACCATGACTGTGACCCAGTGATTATACACCGTGATCTCAAGCCTAGTAATATATTATTGGACGGTGAGATGGAAGCCAGAGTGGCAGATTTTGGGGTGGCTAAGCTAATTCAAAGTGATGAATCTATGTCCGTCATTGCTGGATCCTATGGCTACATAGCTCCAGAATATGCCTACACTCTACAAGTAGACGAGAAGAGTGATATCTACAGCTATGGGGTGCTGCTCATGGAGATTTTGACCAGTAAACGATCGGTGGACTCAGAGTTTGGTGATGGGAACAGTATTGTGGATTGGGTGAGAGGAAAGGTGAAAGCTCAAAGCATTGATTCTATATTGGATAAGAATGTTGGAGCTGAGTGTAAGTCAGTGAAGGAGGAGATGATACAGATGTTAAGGATTGCATTACTATGCACTTGTCGAAATCCCTCAGATCGACCTTCTATGAGAGATGTTGTGTTGATGCTTCAAGAGGCAATGCCAAAGAGGAAACTGGTTGATACTGTGACGGCTACACAACGTGTTGCTAACGATAATACTGGCGGCGGCGGCGGCGATGGTGGCGGTGGTAATAATATTGTCTTACCATGCCAAAGTTTCTCAGGAAAATTAACCTAG 3135 0.4581 MKSFLLFLTFSFFCQIYLAFSASSTPPIQLISLLSLKSSFKDPLNKLHDWDPSSTFSNSNFQDPFWCSWSGITCHSKTAQITSIDVSNRNLSGTVSPEIRYLTTLNHLNISGNGFSGSFQAAFFELTELRTLDISHNSFNSTFPPGISKLKFLRIFNAYSNNFVGPLPQEFIRLRFLEQLNLGGSYFSDRIPSAYGSFPRLKVLHLAGNVLEGPIPPQLGFLSQLERLEIGYNQFSGGIPEEFTSLASLKYLDISSANLSGPVTPQLGNLTMLETLLLFKNRFTGEIPPSLGNLKALTALDLSDNELTGSIPEEVGLLKELNILSLMENKMTGEIPQGIGELPYLDTLQLFNNSLTGILPPMLGSNGLLQRLDVSTNSLSGPIPPRVCKGNKLIKLILFRNKFEGAIPESLVNCTSLTRARIHNNQLNGSIPSGFGLLPNLTFVDMSNNNFVGQIPEDFGNAVKIQYLNLSGNSFESRLPRNIWNASNLQIFSASSSKIIGEIPDFIGCQNIYRIELHGNSLNGTIPWDIGHCEKLLQLNLSHNSLTGIIPWEISALPSITDVDLSHNFLTGTIPSNFNNCTTLENFNVSYNLLTGPIPSAGSTFHPSSFTGNEGLCGGILAKPCAADAEALAASSDVELHNKQQPKKTAGAIVWIVTAAFGIGLFALVAGTRCFRANYGGSFSGGDDHRDVGPWTLTAFQRLNFTAEDVIECLSMSNKILGMGSTGTVYKVEMPGGEIVAVKKLWGKHKENSNIIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGNNCNNLAADWLTRYKIALGVAQGICYLHHDCDPVIIHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVLLMEILTSKRSVDSEFGDGNSIVDWVRGKVKAQSIDSILDKNVGAECKSVKEEMIQMLRIALLCTCRNPSDRPSMRDVVLMLQEAMPKRKLVDTVTATQRVANDNTGGGGGDGGGGNNIVLPCQSFSGKLT 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2494 1044 ProSiteProfiles Leucine-rich repeat profile. 296 318 IPR001611 GO:0005515
Acco01g2494 1044 Pfam Protein kinase domain 718 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2494 1044 Gene3D Ribonuclease Inhibitor 288 388 IPR032675 -
Acco01g2494 1044 SMART serkin_6 715 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2494 1044 FunFam Leucine-rich repeat receptor-like protein kinase TDR 317 627 - -
Acco01g2494 1044 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Acco01g2494 1044 FunFam Leucine-rich repeat receptor-like protein kinase 29 191 - -
Acco01g2494 1044 SUPERFAMILY Protein kinase-like (PK-like) 719 995 IPR011009 -
Acco01g2494 1044 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 242 997 - -
Acco01g2494 1044 FunFam leucine-rich repeat receptor-like protein kinase TDR 797 1007 - -
Acco01g2494 1044 Gene3D Transferase(Phosphotransferase) domain 1 797 1018 - -
Acco01g2494 1044 Gene3D Phosphorylase Kinase; domain 1 701 796 - -
Acco01g2494 1044 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 686 796 - -
Acco01g2494 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Acco01g2494 1044 ProSiteProfiles Protein kinase domain profile. 715 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2494 1044 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Acco01g2494 1044 Gene3D Ribonuclease Inhibitor 389 508 IPR032675 -
Acco01g2494 1044 SUPERFAMILY RNI-like 266 601 - -
Acco01g2494 1044 Pfam Leucine Rich Repeat 536 557 IPR001611 GO:0005515
Acco01g2494 1044 SUPERFAMILY L domain-like 50 297 - -
Acco01g2494 1044 SMART LRR_typ_2 438 461 IPR003591 -
Acco01g2494 1044 SMART LRR_typ_2 294 318 IPR003591 -
Acco01g2494 1044 SMART LRR_typ_2 557 580 IPR003591 -
Acco01g2494 1044 SMART LRR_typ_2 198 222 IPR003591 -
Acco01g2494 1044 SMART LRR_typ_2 126 150 IPR003591 -
Acco01g2494 1044 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 216 311 - -
Acco01g2494 1044 Gene3D Ribonuclease Inhibitor 30 192 IPR032675 -
Acco01g2494 1044 Gene3D Ribonuclease Inhibitor 509 627 IPR032675 -
Acco01g2494 1044 Gene3D Ribonuclease Inhibitor 193 287 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2494 Acco-ChrAcco01 42017701 42021855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2494 33 1010 Receptor kinase-like Gene Family AT1G08590 43.072 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco01g2494 Pkinase 1.7e-47 CL0016