Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2473 ATGGAGAGTTTCAGCAGCAGCTCACTGTCAAGGCCGATTCATGTGTATCTCAGTTTCAAAGGAGATTTTGAAACTTGCAAATTCACGGATAGGCTTTGGGCTGCTCTTGAAACTGACGATTTAAATACCTTTTGGGATGACAAGAAGCTTGACTCAGGTGATTCCATCATTCTACCGCGTCACTTTCTCAAAGCAATTCGACAATCCAACATTTCCATTGTTGTCTTCTCCAAAAACTATGCTTCTTCTCTATGGTGCCTTGAGGAACTCTCTGAGATTGCTGGCCGCACTCATGAACCGCGATACACTATTTTCCCAATTTTCTATGATGTAGGTCCATCCGAGGTACAGAACCAGAGTAACTCTTTCGAAAAAGCTTTCTCTGAACATGAACAAAGGTTCACAGCAAATTTACACAAAGTACACAGGTGGAGGTCAGCAATGAAACAAGTGGCCAACCTATCTGGTTGGTATGTACAGCACGGGTCAGGGCCACAAGTTATAGATGATATCATAATAAAGGTCAAGAAAAAAATGCGTGAATTAGTTTATGCTGATGTAGATCTGGTGGGGATGAAATCTCGAGTGAAAGAAGTAGAAAAGCTTCTGGATTTGGGTTCAAATGATCGGGTTCAAGTTTTGGGCATTTGTGGTATGGGTGGAATAGGGAAGTCAACTCTTGCCAGAGTTTTATATGATAAGATCTCTCACCGCTTTCATGCTTCTTATTTCCTGCTTAACCTATCTGAATTTTATAGCAAGAGGCTAGCATGTGGAAAGAGTATCCTCATAATTCTTGATGATGTTGATGAAGACATAAATTTGATGCCACTGATCAAGCCCATAAAAACTAATTGGTTAGGTAAAGGAAGTAGAGTTATCATCACAACCAGAGATGAAGGAGTCCTTAAAATATTTGGGATATATGATATTTATAGGGTTAAACTATTGACCAGGGATGAAGCTCTTCAATTATTTTGTAGAAAAGCTTTCAAATGTGATTTTCATGCGAGAGATTATGAGCAGCAAATAAATAGGGTGTTAGAATATGCTAATGGCCTACCATTAGCTATTGTGATACTGGGCTCATTATTATATAATACAAGAGTCTCAGAATGGAGATGTTCTTTGGGTGAGATCAAAAAGGCTGCTAACCATATGATCGTGAAGGTCCTCAAAAAAAGTTTTAAGCAACTGAATTATGACAGCAGGGAAATATTTCTAGACATTGCGTGTTTTTTCAATGGGAAGGAGATTAAATATGTAGAAGGAATTTTAAATAGTTATAGGTTTCCTGATGAGGAAATTATTCAAGTGAAGCTGCAAATACAGCTTTTAATTGAAAAATCACTCATGACCATCATAGATCAAAAAATACAAATGCACGGTTTATTGCAAGAAATGGGAAGAGATATTGTTCGGGGTGATTTCCCTTTCATGCCAGAAAGGTGGAGCAGATTGTGGGATTTTAATGATATTTTTCATGTTATGAAAAATGTCACGGATACTCAGATAGTTAAAGCAATAGTCTTGGATCTAGAAAATTCACAAAAAAGATTATTAAGTGTCCAAGCTTTATCACATATGAGCAATCTTAGACTACTCATATTTCGTAATGTGAAGTTTTATGGAGCTCTCAAGCATCTTTCACTTGAGCTCCGATATGTTTCATGGCACCAATATCCTTTCATGTGTCTGCCGTCAAGTTTTGTGCCACATAATCTCATTGAACTGATCTTGCCTGATAGCTCCATCACAAGTATATGGGAAGGAGAAGCTCAACTTCAATTCTTAATTTCGAGAAAGATAAGAGACCGACAAGGACCTGCATGGGCAAGAGATAAGTCATTGTTGTTTTGTGCATGA 1866 0.3789 MESFSSSSLSRPIHVYLSFKGDFETCKFTDRLWAALETDDLNTFWDDKKLDSGDSIILPRHFLKAIRQSNISIVVFSKNYASSLWCLEELSEIAGRTHEPRYTIFPIFYDVGPSEVQNQSNSFEKAFSEHEQRFTANLHKVHRWRSAMKQVANLSGWYVQHGSGPQVIDDIIIKVKKKMRELVYADVDLVGMKSRVKEVEKLLDLGSNDRVQVLGICGMGGIGKSTLARVLYDKISHRFHASYFLLNLSEFYSKRLACGKSILIILDDVDEDINLMPLIKPIKTNWLGKGSRVIITTRDEGVLKIFGIYDIYRVKLLTRDEALQLFCRKAFKCDFHARDYEQQINRVLEYANGLPLAIVILGSLLYNTRVSEWRCSLGEIKKAANHMIVKVLKKSFKQLNYDSREIFLDIACFFNGKEIKYVEGILNSYRFPDEEIIQVKLQIQLLIEKSLMTIIDQKIQMHGLLQEMGRDIVRGDFPFMPERWSRLWDFNDIFHVMKNVTDTQIVKAIVLDLENSQKRLLSVQALSHMSNLRLLIFRNVKFYGALKHLSLELRYVSWHQYPFMCLPSSFVPHNLIELILPDSSITSIWEGEAQLQFLISRKIRDRQGPAWARDKSLLFCA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2473 621 PRINTS Disease resistance protein signature 213 228 - -
Acco01g2473 621 PRINTS Disease resistance protein signature 351 365 - -
Acco01g2473 621 PRINTS Disease resistance protein signature 503 519 - -
Acco01g2473 621 Gene3D Ribonuclease Inhibitor 490 606 IPR032675 -
Acco01g2473 621 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 594 IPR044974 GO:0006952
Acco01g2473 621 SUPERFAMILY L domain-like 508 598 - -
Acco01g2473 621 Gene3D - 180 254 IPR027417 -
Acco01g2473 621 ProSiteProfiles TIR domain profile. 11 179 IPR000157 GO:0007165
Acco01g2473 621 Pfam TIR domain 14 159 IPR000157 GO:0007165
Acco01g2473 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 410 IPR027417 -
Acco01g2473 621 Gene3D - 255 307 IPR027417 -
Acco01g2473 621 Pfam NB-ARC domain 259 397 IPR002182 GO:0043531
Acco01g2473 621 Pfam NB-ARC domain 196 244 IPR002182 GO:0043531
Acco01g2473 621 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Acco01g2473 621 SUPERFAMILY "Winged helix" DNA-binding domain 388 498 IPR036390 -
Acco01g2473 621 Gene3D - 7 179 IPR035897 -
Acco01g2473 621 SMART till_3 12 154 IPR000157 GO:0007165
Acco01g2473 621 Gene3D - 316 400 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2473 Acco-ChrAcco01 41768949 41771152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2473 63 592 WRKY Transcription Factor Family AT4G12020 28.920 1.13e-55 202