Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2470 ATGGAGAGTTTCATTACCGGATCATCATCGTCATCAAGGCCCATCCATGTTTATTTAAGTTTAAAAGGAGATGATAAAACTTGCAGATTCACAGACAGGCTTTGGGCTGCTCTTGCAACTGAAGATTTGAACACCTTTTGGGAAAACAAAAATCTTGAACCAGGTGATGACTCCATTTTTCTTCCACGGCACTTTCCTAAAGCAATTAAACAATCCAACATTTCTATTGTTGTCTTCTCCAAAAGCTATGCTTCTTCTATATGGTGCCTTCAGGAGCTCTCTGAGATCGCTGCACGCATTCATGAACCGCGATACGCTGTTATCCCAATTTTCTATGACGTACTTCCATCTGAGGTTCAAAATTTGACTAATTCTTTTGAAAGAGATTTCACTGTACATGAACAAAGGTTCAAAACAAATTTACGCCAGGTTCAGAGTTGGAGGTTAGCCATGAAAGAAGTGGCCAATCTCTCTGGTTCGCATGTACCATACGATCCATGTCCACAAGTTATTGATGACATTGTTAGAGAGGTGAAGAAAAAAGTCTGTAAATTGGGTTGTGTTGATGCAGACCTCGTAGGAATGCAATCTCGAGTGAGAGAAGTGCAAGAGCTTCTTGACTTGGGCTCGAATGATGAAATTAGAGTTGTGGGCATTTGTGGTATGGGAGGGATAGGGAAATCAACTCTTGCAAGAGTTGTGCATGATAGGATCTCTCACCATTTTGATGCTTCTTATTTCCTACATAACCTATCTGAACTTCACATGTGCAAGAGGATGGAACGTGGAAAGAAGATTCTCTTAGTTTTTGATGACCTTGTTCGTTACCAAAACCTGATACCATTAATCACGACTGTTGCTTGGTTGTTAGGTGTAGGGAGTAGAATCATCATAACAACCAGAGATGAAGGAGTGCTTAAAAGGTTTCAGAAGCATCATATTTATAGGGTTAAACTATTGAGTAGAGATGAAGCTCTTCAATTATTTTGTCGGAAAGCTTTTAGATGTGATTTTCCTGTAAGAGGTTATGATGTTGAGCTAATAAATAGGGCACTTGAATATGCTAGCGGCCTTCCACTAGCAATTGTAAAATTGGGCTCATATTTATATAATACAAGATCCTCTGAATGGAGCACAGCACTGGTTGAATTCAAAAAAGTTGCTAGCTTTATCGTATTGAAGGTTCTCGAAAGAAGTTTTGATGAATTGGACTTCTATGGTCGGGAAAGGTTTCTAGACATTGCATGCTTTTTCATAGGGAAGGAGGCGAAATATGTACAAGGCATTTTAGATTGTCATTTTTATACTCCTCAGGAAACCTCTCCGATAGGTGTGCATGCAAATCATGAGAGTGATATACCACATTATGTGAAGAGTGATGTACAAAGATTAATTGAAAAATCACTTGTGACTATTATAGACCAAAAAATCCAAATGCATAGTCTGTTGCAAGAAATGGGAAGAAAAATTGTTCAGCAAATATTCCCTTCCAAGCCGGAAAAGTGGAGCAGATTGTGGGATTTCAATGATATTTATCGAGTTATGCAAAATGACTCTGCTACTCTTGAAGTTGAAGCTATAGTCTTGGATCTAGAAGATTCACAAAGGAGTCCTTTAAAAGTCGAAGCTTTATCACGCATGAGCAATCTAAGACTTCTCATATTTCGTAATGTGAAATTTTCTGGAGTTCTAGATCATCTTTCATGGAAGCTTCAACACATTTCATGGCACCAATATCCTTTCACTTCTTTGCCATCAAGTTCTCAACCATATAAACTAAGGGAATTGATTTTGCGTGAGAGCTGCATCATAAGTATATGGGATGAAGAAAAGGTTCCTAATAGAGAAGTAAAGGAATTCTTTGTTTTGAATAACATGAATCTTAGTGGGTCCAAAGATTTAATAAAATTGCCAAATTTTGAAGGACTTCCATGTCTCGAGAGACTAGAGCTTGAAGGATGCACTAAAATATCACAGCTTGCTCCATCTATTGCTTCTGTTTCATCGCTCAAATTCTTAAATTTGAGAAATTGCAGTAATCTAGTTGGTATTCCCAATGAATTATTTTCTCGACCCTCTTTAGAAATGTTAAACCTGGCTTGTTGCTCTAAACTTGCATATTGTTTGAAGTATGGTCCTGTTGATCTTGAGGAGCTTGGTGAAAGAGAAAGTTTCAGCAATCTTTCTTGCAAGAGACAGAAGCTATGCAGACAAAAATCTATTTAA 2226 0.3783 MESFITGSSSSSRPIHVYLSLKGDDKTCRFTDRLWAALATEDLNTFWENKNLEPGDDSIFLPRHFPKAIKQSNISIVVFSKSYASSIWCLQELSEIAARIHEPRYAVIPIFYDVLPSEVQNLTNSFERDFTVHEQRFKTNLRQVQSWRLAMKEVANLSGSHVPYDPCPQVIDDIVREVKKKVCKLGCVDADLVGMQSRVREVQELLDLGSNDEIRVVGICGMGGIGKSTLARVVHDRISHHFDASYFLHNLSELHMCKRMERGKKILLVFDDLVRYQNLIPLITTVAWLLGVGSRIIITTRDEGVLKRFQKHHIYRVKLLSRDEALQLFCRKAFRCDFPVRGYDVELINRALEYASGLPLAIVKLGSYLYNTRSSEWSTALVEFKKVASFIVLKVLERSFDELDFYGRERFLDIACFFIGKEAKYVQGILDCHFYTPQETSPIGVHANHESDIPHYVKSDVQRLIEKSLVTIIDQKIQMHSLLQEMGRKIVQQIFPSKPEKWSRLWDFNDIYRVMQNDSATLEVEAIVLDLEDSQRSPLKVEALSRMSNLRLLIFRNVKFSGVLDHLSWKLQHISWHQYPFTSLPSSSQPYKLRELILRESCIISIWDEEKVPNREVKEFFVLNNMNLSGSKDLIKLPNFEGLPCLERLELEGCTKISQLAPSIASVSSLKFLNLRNCSNLVGIPNELFSRPSLEMLNLACCSKLAYCLKYGPVDLEELGERESFSNLSCKRQKLCRQKSI 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2470 741 SUPERFAMILY L domain-like 494 719 - -
Acco01g2470 741 Gene3D - 253 315 IPR027417 -
Acco01g2470 741 Gene3D - 187 252 IPR027417 -
Acco01g2470 741 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 414 IPR027417 -
Acco01g2470 741 ProSiteProfiles TIR domain profile. 13 182 IPR000157 GO:0007165
Acco01g2470 741 PRINTS Disease resistance protein signature 216 231 - -
Acco01g2470 741 PRINTS Disease resistance protein signature 355 369 - -
Acco01g2470 741 PRINTS Disease resistance protein signature 665 681 - -
Acco01g2470 741 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Acco01g2470 741 SMART till_3 14 157 IPR000157 GO:0007165
Acco01g2470 741 Pfam NB-ARC domain 256 386 IPR002182 GO:0043531
Acco01g2470 741 Pfam NB-ARC domain 197 245 IPR002182 GO:0043531
Acco01g2470 741 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 708 IPR044974 GO:0006952
Acco01g2470 741 Pfam TIR domain 16 178 IPR000157 GO:0007165
Acco01g2470 741 Gene3D Ribonuclease Inhibitor 513 726 IPR032675 -
Acco01g2470 741 Gene3D - 319 404 IPR042197 -
Acco01g2470 741 Gene3D - 7 186 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2470 Acco-ChrAcco01 41722020 41724897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2470 68 706 WRKY Transcription Factor Family AT4G12020 29.855 2.94e-62 225