Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2466 ATGGAAAGTTTCATTACCGGATCATCGTCATCATCAAGGCCCATCCATGTTTACTTAAGTTTTAAAGGAGATGATCAAACTTGCAGATTCACAGATATGCTTTGGGCCGCTCTAGAAACTGATGATTTAAACACCTTCTGGGATGACAAGAATCTTGAACCAGGTGACTCCATCTTTCTACCACGTCACTTTCTGAAAGCAATTAAACAATCCAATATTTCTATTGTTGTCTTCTCCAAAAAATATGCTTCTTCTATATGGTGCTTTGAGGAGCTCTCTGAGATCGCTGCACGCATTCATGAACCACGATACGTTGTTATCCCGATTTTCTATGACGTACTTCCATTTGAGGTTCAAAATCAGACTAATTCTTTTGAAAGCGCTTTCATTGAACATGAACAAAGGTTCACAACAAATTTACGCCAGATTCATAGTTGGAGGTTTGCCATGAAACAAGTGGCCAATCTCTCTGGTTGGCATGTACCGTACGGTCCGTGTCCACAAATCATTGATGACTTTGTTAGAGAGGTCAACAAAAAAGTCTGTAAATTGGGTTATGTTGATGCAGACCTAGTAGGGATGCAATCTCGAGTGAGAGAAGTACAAGAGCTTCTTGATTTGGGTTCAAATCATGAAATTAGAGTTGTGGGCATTTGTGGTATGGGTGGGGTAGGGAAGAAAGCCCTTGCAAGAGTTGTGTATGATAGGATCTCTCACCATTTTGATGCTTCTTATTTCCTATCTGACCTATCTGAATTTTACATATTTGACTTGTGTACAAAAATGGCTGCTAGCTTGTTAGGTGTAGGGGGTAGAATCATCATAACAACCAGAGATGAAGGAGTGCTTAGATCGTTTGAGAAACATCATATCTATAGGGCTAAACTATTGAGTAGAGATGAAGCTCTTCAATTATTTTGTCGGAAAGCTTTCAGATGTGATTTTCCTATAAGAGAGCATCTTCCAAGGAAGCTTCAACACATTTCATGGCACCAATATCCTTTCACTTCTTTGCCATCAAGTTTTCAACCATATCGTCTTAAGGAATTGATTTTGCCTGATAGCTGCATCACAAGTATATGGGATGAAGAAAAGGTTCCTAATAGAGAAGTAAAGGTAATGTTAATTGTGCCTGCGCCTTTAGGCATCAAATTATCTTCAAAAGCTCAGCGATCATCAAGACTGAAACGTTACAGACACATGGAGAGTTTCATTTCCGGATCTTCATCATCATCAAGGCCCATCCATGTCTATCTAAGCTTCAAAGGAGATGATGAAACTTGCAAATTCACAGATATGCTTTGGGCTGCTCTTGAAACTGACGATTTAAACACCTTTTGGGATGACAAGAAGCTTGAACCACGTGACTCCATCTTTCTACCACATCACTTTCTTAAAGCAATTAAACAATCCAACATTTCTATTGTTGTCTTCTCCAAAAGCTATGCTTCTTCTCTATGGTGCCTTGAGGAACTCTCTGAGATCGCTGCACACATTCATGAACCGCGACACACTGTTATCCCAATTTTCTATGACGTACTTCCATCTGAGGTTCAAAATCAGACTAATTCTTTGGGCAGTGCTTTCGCAGAACATGAACAAAGGATCACAACAAATTTGCGCCAGGTTCATAATTGGAGGTTTGCCATGAAACAAGTGGCCAATCTCTCTAGTTGGCATGTACCATATGATCCATGTCCACAAGTTATTGATGACATTGTTAGAGATGTGAAGAAAAAAATCTGTAAATTGGGTTATGCTGATGCAGATCTAGTAGGGATGCAACGTCAAGTGAGAGAAGTACAAGAGCTTCTTGATTTGCATTCAAATGGTGAAATTAGAGTTGTGGGCATTTGTGGTATGGGCGGGATAGGGAAATCGACTCTTGCAAGTGTTGTGTATGACAGGATCTCTCGCCATTTTGATGCTTCTTATTTCCTATTTAATCTATCTGAATTAGACAATGGCACGAGGATCGTACATGGAAAGAAGATTCTCTTAGTTCTTGACGATCTTTTTCGTTACCAACGTCTGACACCATTAATCGAGACTGCTAGCTTGTTAGGTGTTGGGAGTAGAATCATCATAACAACCAGAGATGAAGGAGTGCTTAGATGGTTTGAGAAGCATCATATTTATAGGGTTAAACTATTGAGAAGAGATGAAGCTTTTCAATTATTTTGTCGGAAAGCTTTCAGATGTGATTTTCCTGCTACTTTTAATTATTATGTTGAAGCTATAGTCTTGGATCTAGAAGATTCACAAAGGAGTCCTTTAAAAGTTGAAACTTTATCACATATGAGCAATCTTAGACTTCTCATATTTCGTAATGTGAAATTTTTCGGAGTTCTAGAGAATCTTTCACCGCGCCTTCGACACATTTCATGGCACCAATATCCTTTCACTTCTTTGCCATCAAGTTATCAACCATATAATCTTAGGGAATTGATTTTGCCTGACAGCTGCATCACAAGTATATGGGTTGAAGAAAAGGTTCCTAATAGAGAAGTAAAGAGAATCCCTAAGACGATGGATGACAAGAAGCCTGACACATGTGATTCCATCGTAATTCCTCGTCACTTTCTCAGAGCAATTCGTCAATCTAACATTTCAATTGTTGTCTTCTCCAAAAACTATGCTTATTCCATATGGTGCCTTGAGGAGCTCTCTGAGATCGCTGCACGCATACATGAACCGAGATATACTGTTTTCCCGATTTTCTATGATGTACATCCATCTGAGGTAGAAAACCAGAGTAATTCTTTTGAAAAAGCTTTTGCTCAACATGAACAAAGGTTAACAGCAAATTTACCCAAGGTACGCAGCTGGAAGTTAGCAATAAAACAAGTGGCCAATCTCTACAGTTGGGATGTCCCTTCCGAGCCAAAGCCACAAGTTATTGATGATATCATTAAGTAG 2919 0.3919 MESFITGSSSSSRPIHVYLSFKGDDQTCRFTDMLWAALETDDLNTFWDDKNLEPGDSIFLPRHFLKAIKQSNISIVVFSKKYASSIWCFEELSEIAARIHEPRYVVIPIFYDVLPFEVQNQTNSFESAFIEHEQRFTTNLRQIHSWRFAMKQVANLSGWHVPYGPCPQIIDDFVREVNKKVCKLGYVDADLVGMQSRVREVQELLDLGSNHEIRVVGICGMGGVGKKALARVVYDRISHHFDASYFLSDLSEFYIFDLCTKMAASLLGVGGRIIITTRDEGVLRSFEKHHIYRAKLLSRDEALQLFCRKAFRCDFPIREHLPRKLQHISWHQYPFTSLPSSFQPYRLKELILPDSCITSIWDEEKVPNREVKVMLIVPAPLGIKLSSKAQRSSRLKRYRHMESFISGSSSSSRPIHVYLSFKGDDETCKFTDMLWAALETDDLNTFWDDKKLEPRDSIFLPHHFLKAIKQSNISIVVFSKSYASSLWCLEELSEIAAHIHEPRHTVIPIFYDVLPSEVQNQTNSLGSAFAEHEQRITTNLRQVHNWRFAMKQVANLSSWHVPYDPCPQVIDDIVRDVKKKICKLGYADADLVGMQRQVREVQELLDLHSNGEIRVVGICGMGGIGKSTLASVVYDRISRHFDASYFLFNLSELDNGTRIVHGKKILLVLDDLFRYQRLTPLIETASLLGVGSRIIITTRDEGVLRWFEKHHIYRVKLLRRDEAFQLFCRKAFRCDFPATFNYYVEAIVLDLEDSQRSPLKVETLSHMSNLRLLIFRNVKFFGVLENLSPRLRHISWHQYPFTSLPSSYQPYNLRELILPDSCITSIWVEEKVPNREVKRIPKTMDDKKPDTCDSIVIPRHFLRAIRQSNISIVVFSKNYAYSIWCLEELSEIAARIHEPRYTVFPIFYDVHPSEVENQSNSFEKAFAQHEQRLTANLPKVRSWKLAIKQVANLYSWDVPSEPKPQVIDDIIK 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2466 972 ProSiteProfiles TIR domain profile. 809 972 IPR000157 GO:0007165
Acco01g2466 972 Pfam TIR domain 16 152 IPR000157 GO:0007165
Acco01g2466 972 Pfam TIR domain 416 577 IPR000157 GO:0007165
Acco01g2466 972 Pfam TIR domain 860 949 IPR000157 GO:0007165
Acco01g2466 972 ProSiteProfiles TIR domain profile. 413 581 IPR000157 GO:0007165
Acco01g2466 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 321 IPR027417 -
Acco01g2466 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 748 IPR027417 -
Acco01g2466 972 SUPERFAMILY Toll/Interleukin receptor TIR domain 858 955 IPR035897 -
Acco01g2466 972 Gene3D - 7 185 IPR035897 -
Acco01g2466 972 SMART till_3 14 156 IPR000157 GO:0007165
Acco01g2466 972 SMART till_3 807 953 IPR000157 GO:0007165
Acco01g2466 972 SMART till_3 414 556 IPR000157 GO:0007165
Acco01g2466 972 SUPERFAMILY L domain-like 737 829 - -
Acco01g2466 972 Gene3D Ribonuclease Inhibitor 726 832 IPR032675 -
Acco01g2466 972 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Acco01g2466 972 SUPERFAMILY Toll/Interleukin receptor TIR domain 405 559 IPR035897 -
Acco01g2466 972 Gene3D - 186 269 IPR027417 -
Acco01g2466 972 Gene3D - 654 712 IPR027417 -
Acco01g2466 972 Gene3D - 586 653 IPR027417 -
Acco01g2466 972 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 856 972 IPR044974 GO:0006952
Acco01g2466 972 Gene3D - 412 585 IPR035897 -
Acco01g2466 972 Gene3D - 833 972 IPR035897 -
Acco01g2466 972 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Acco01g2466 972 Pfam NB-ARC domain 658 739 IPR002182 GO:0043531
Acco01g2466 972 Pfam NB-ARC domain 596 653 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2466 Acco-ChrAcco01 41662847 41671826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2466 739 832 WRKY Transcription Factor Family AT4G12020 35.294 2.74e-08 56.2