Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2462 ATGGACCTGAAGTCAAATCACACTCCTGTTCTTACTGATGCTGCATCCATGACGAGATTGAGATTGGGCGTGCATTCCAGTCTATTGCCTTATTCTCCTACAGGGGCAGCTTTTCCAACTGGCCTGCCTCTGACTATCCCTAGGAAGAAGACTGGAATTCTTGATGATTTTCGTTGTAGTAGTTGGCTGGATGCCATGAAATCTTCTTCTCCTACAGCCAAGAAGATAACAAAGGATATTAATCATGGTTTTGCATCATCTGATGCCGATAGTGCTTATAGTACCTGGCTGCTAAAGTATCCATCAGCACTTGCATCTTTTGAGCAAATCGCAAACCACGCCAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAAGTGGCAGAGCTTTTTCCCACTGCAATAATTAGTGGAAGAAGCCGTCACAAGGTACATGACTTTGTAGGACTAACTGAACTCTATTATGCTGGTAGCCATGGGATGGACATCATTGGTCCTGTGAGACAATATGTATCTGATAACCATCCTAATTGCATTAGGTCTACTGACAATCAGGGAAAGGAAGTTAATTTATTCCAACCCGCTGCTGAATTCTTGCCCATGATTGATAAGGTGCTTGATTCCCTCATTGAATGTACAAAAGACATTAAAGGAGCAAAAGTTGAGAACAATAAATTTTGTGTCTCTGTACATTATCGCAACGTAGAGGAGAAGGATTGGGAAATAGTGGGGCAGAGAGTCCACGATATTCTTAAGGACTATCCACGTTTGCGATTGACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAATGATTGATTGGGATAAGGGGAAAGCCGTCACATTTTTACTTGAATCTCTTGGGCTTAGCAACTGTGATGATGTGCTGCCTATATATGTTGGAGATGATCGGACTGATGAAGATGCTTTTAAGGTTTTGAGGGAGGAAAATAAAGGTTATGGCATCCTAGTTGCTTCTGCGCCGAAGGAAAGCAATGCAATCTACTCCCTTCGCGATCCATCAGAGGTTATGGAATTTCTCAAGACTCTTGTGGGTTTATAG 1137 0.4248 MDLKSNHTPVLTDAASMTRLRLGVHSSLLPYSPTGAAFPTGLPLTIPRKKTGILDDFRCSSWLDAMKSSSPTAKKITKDINHGFASSDADSAYSTWLLKYPSALASFEQIANHAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAELFPTAIISGRSRHKVHDFVGLTELYYAGSHGMDIIGPVRQYVSDNHPNCIRSTDNQGKEVNLFQPAAEFLPMIDKVLDSLIECTKDIKGAKVENNKFCVSVHYRNVEEKDWEIVGQRVHDILKDYPRLRLTHGRKVLEVRPMIDWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREENKGYGILVASAPKESNAIYSLRDPSEVMEFLKTLVGL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2462 378 FunFam Trehalose 6-phosphate phosphatase 226 378 - -
Acco01g2462 378 Pfam Trehalose-phosphatase 122 366 IPR003337 GO:0003824|GO:0005992
Acco01g2462 378 SUPERFAMILY HAD-like 120 376 IPR036412 -
Acco01g2462 378 CDD HAD_TPP 120 370 - -
Acco01g2462 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 376 IPR044651 GO:0004805|GO:0005992
Acco01g2462 378 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Acco01g2462 378 NCBIfam trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Acco01g2462 378 Gene3D - 119 210 IPR023214 -
Acco01g2462 378 Gene3D - 219 378 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2462 Acco-ChrAcco01 41617077 41619698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2462 113 375 Trehalose Biosynthesis Gene Families AT1G70290 25.795 1.65e-10 60.8