Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2449 ATGGCTTCATCAATTCCTAGTTCTCATCACAACACTTTCTTCTCAATCCTTCTTTCCTTTTCATTGATCTTCTCAATCTCTCACACGGCCATTGCTGCTTCATCTTATTCATCGTATTCTCCTCCTCCTTCCAACTCCTCCAATACCCTAAAAACCTACAAAGCTTTCATAAAACAGTATTGTAGCTCCACCACATACCCAAAAAATTGCTACAAGTATCTCTCTCCTTATGCTTCTGTGATCAAAACAAGCCCTCTTGTTCTCACCAAGTCCTCCATTTATGTTTCTCTCAAACAAACCATCAAGTCATATTCTGCACTCAAATCGTTGACCGAAGTCAAGGGTCTTACTCACAATGAAACCCAAGTCATCAAGGATTGTTACGAGAACATTGGTTATTCACTTGATGAGGTTAATGATTCGGCTGCCGCCGTCAAGAACTTGACCGGCGGTAACACCTACGATGAGGCGTTTGAGTGGAGTAACATAAAGACGTGGATGAGCGCCGCCATTACAAGTTATTACACGTGCACCGACGAGTTTGATGAGCTGACGATAAGAGCTTCTTTGCAAAAGAAGATCACAACAGATGTCTTGAAAGCTGAAAACATGGTTAGCAATGCTCTCTCATGCGTCAACAAATTCACCTCTTACTAA 657 0.4186 MASSIPSSHHNTFFSILLSFSLIFSISHTAIAASSYSSYSPPPSNSSNTLKTYKAFIKQYCSSTTYPKNCYKYLSPYASVIKTSPLVLTKSSIYVSLKQTIKSYSALKSLTEVKGLTHNETQVIKDCYENIGYSLDEVNDSAAAVKNLTGGNTYDEAFEWSNIKTWMSAAITSYYTCTDEFDELTIRASLQKKITTDVLKAENMVSNALSCVNKFTSY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2449 218 Pfam Plant invertase/pectin methylesterase inhibitor 56 210 IPR006501 GO:0004857
Acco01g2449 218 CDD PMEI-like_3 61 217 - -
Acco01g2449 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 210 - -
Acco01g2449 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 217 IPR035513 -
Acco01g2449 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 216 IPR035513 -
Acco01g2449 218 NCBIfam pectinesterase inhibitor domain 32 214 IPR006501 GO:0004857
Acco01g2449 218 SMART PMEI_2 52 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2449 Acco-ChrAcco01 41428646 41429302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2449 52 216 Carbohydrate Esterase AT1G53830 30.588 1.57e-13 67.0