Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2448 ATGGCTTCACATCACAACCCTTTGTTCTCAATCCTTCTTGCCTTTTCATTACTCATCTCAACCTTCAACATTGCCATTGCTGCTGCTTCTTCTTCCTCCTCCTCCTCCATCCCCACCAAAACCCTAAATACCTACATGACTTTCATTAAAGGGTACTGTAGTTCCACCACATACCCTAAAAATTGCTACAAGTTTCTCTCTCCTTATGCCTCTGTGATCAAAACAAGCCCTCTTATTCTCACCAGGGCCTCCATTTATATTTCTCTTAAAGAAACCAGCAAGTCACGTTATGCCCTCAAATCGCTTTCCACTGTCCAGGGTCTCACTCACAATGAAACCCTAGTTTTGAAAGACTGTGTCGAGAACGTTGATAATTCCCTTTATAGGGTGAAGCAATCAGCCATATCCGTTAAGGACCTGAACGGTACCGCCTCCGGCAAGGAGGCCTTCGAGTGGAGTAACATAAAGACGTATATGAGCGCCGCAATTACATGTTATACCACCTGCACCGACGAGTTTGATGAGAAGAAGATAAGAGCTTCGTTGCAAGAGAAGATCTCAAGCAGAGTCACAAAAGCTCATGACTTGGTTAGCAATGCTCTCTCAGTTGTCAACAAATTCACTTCATATTGA 633 0.4376 MASHHNPLFSILLAFSLLISTFNIAIAAASSSSSSSIPTKTLNTYMTFIKGYCSSTTYPKNCYKFLSPYASVIKTSPLILTRASIYISLKETSKSRYALKSLSTVQGLTHNETLVLKDCVENVDNSLYRVKQSAISVKDLNGTASGKEAFEWSNIKTYMSAAITCYTTCTDEFDEKKIRASLQEKISSRVTKAHDLVSNALSVVNKFTSY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2448 210 NCBIfam pectinesterase inhibitor domain 20 206 IPR006501 GO:0004857
Acco01g2448 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 207 IPR035513 -
Acco01g2448 210 CDD PMEI-like_3 53 209 - -
Acco01g2448 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 209 IPR035513 -
Acco01g2448 210 SMART PMEI_2 44 203 IPR006501 GO:0004857
Acco01g2448 210 Pfam Plant invertase/pectin methylesterase inhibitor 48 202 IPR006501 GO:0004857
Acco01g2448 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2448 Acco-ChrAcco01 41423442 41424074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2448 24 208 Carbohydrate Esterase AT1G53830 29.167 1.95e-13 66.6