Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2444 ATGTCGAGCAATTCGCTGCCGCCATCGCATCTCTCTGACATATTGCCGGCGAAACCTACAGGCAATAATGGTTCCCCTTCGAAGACATCATCTCGAGCCAAGCTCCAGAAAAGTCCTCCGGTTCCTAATTGGTGGACTCCGGTAGAGGAAGAAGGCGATCAAAGGAATATTGAAGAGGCGATGCGTAAAATAGAACAGCAGCAAATCGAAGATGCTGCTTCTTCGATTTTGCTTGCATCGTCTTTAGGGCTCAATCACATTAGGACTCGCTCCGATTCACCACGTCTTAGGTTTGCGCCCTTGGTTAATGCGCCTACCAGTCCGAGGAAGGATTCCGTCGGAACTGATGATCGGACTAACGGAAAGAGAATATATGGGACTCATGGTAAATTGTCAAGAGCTCCTTCCCATGCTGTTCCTCTCATGCAGGTGGGTAACGATGACACATTTGCCAAAGAATTGCAGTCGCCGCGTGTTCAAGCCATACTTCGTGTCACAAGTGGACGCAAGAAGAAAATTGATTTCAAAAGCTACTCTCATGAGCTCAACTCAAAAGGTGTCAAAGCTTTCCCAGTTTGGAGAAGTCGTGCAATATTGGGGCATATGGAGGAGATCACGGTGGCAATCAGAACCAAGTTTGGGAAGCTAAAGGAAGAAGTTGATTCTGACTTAAGTGCATTTGCCGGAGATTTAGTGGATCTCCTGGACAAGTTTTCAAAATCACATCCTGAATGGATAGAAAGCTTGGAGGATCTGTTAATTATTGCCCGACGATGTGCAAAGATGTCGCCGAGCGAGTTTTGGATGAACTGCGAAGCCATTGTTCAGGATTTAGACGACAGGCGTCAAGAGTTACCAATCGGGATTCTCAAGCAAGCTCATACACGCCTATTGTTTATCCTCTCCCGATGCACACGTCTCGTGCAGTTCAACAAAGAGAATGTCCATGATCAAGAACACGTTCTGTGTCTTCATCAACTCAGCGATGTTGGAATTTATAGAGAGCACATTTTGAATGCTGTAGAACATAATAAATTCATTGGTGATGAGGAGCAGCCAACAAAATCTCATGGTAAAGAATCTGACAATGATCAGATAATAAATCAAATCCAAATTGATCGTCAACACGTGAGTACTGCAACTGACACATCCAGAAGTGGTGATTCAACTGGAAGCGGCTATAAGATGTCATCTTGGAAAAAGTTTCCAAGTCGTGCTGATAAGAGGTGCAAACATAAAGTTCACGAAGAACAGGGTCAGGTTCATGAAGTCAAAGAAGAAAATGTAGAAAACGTGGATACTGATTCATCCAATCCTGAACTATCCTCTGGAGGCCATAAGCTACATTGGGGATTCTGGGGAGATCACCACAATCTAACATATGAGAACTCAATGATATGCAGAATCTGTGAGGTTGAGATACCAATTGTGTATGTGGAGGAGCACTCTCAAATATGTACCATTGCTGATAGATGTGATTTAAAAGGCCTTACTGTGAGTGAACGGCTTGAAAGATTTGCTGAAACTATTGAAAAGATAATAGAATCATGGACACCTAGAAGCACACCTAAAAGCACCCCTAAAAGCACCCCAAGAAGCACGGATGGTCCTGCTGGAGAAGTCAGCTTTGAGGATGCCAGATTATCTACGTCAAGTTTGCTTGATGAGTTCAATGATTTATCTCTAATTGAGAGAAACAGCTTATCTCGTAGGGGCTCAGAAGACATGCTTGATTCTGTTCCTGAAGATGACGATAATGCTTTTGTTGGGGATCATCATGATCTGAGCCTTTCGCCAAAAATGTCTGATGAAACATATTTCAAACATGATCAATACTCAAAGCTGTCTTCGGTAGGAAGCTTGACACCCAGATCACCATTATTAACCCCACGAACAAGTCAGGTAGAAATGTTATTGAATGCGAGAAGAACAGTATTGGAACTTGATAGTTATTTCCAGATTAACAAACTAGTGGAAATTGCTCGTTCTGTTGCACATGTGAATGACTACAACTATGTAAGTCGTCGCATAGAAGAACTTAATCTCACCATTCAGGCCAGAAAGGTCGATGCTCTCATTGTCGAAACTTTTGGGCGACGCATAGAGACTCTATTGGCGGAAAAGTATCTAACTCTCTGTCATCAAATAGACAACGAAAAGGGAGACTCATCGAATGGCTTGGTTGAAGAAGAGAGTTCAGTGGAAGATGATACTGTTCGAAGCCTTCGTGCTAGCCCTATTCATCATTCTTCTAGGGATCGAACCTCCATTGAAGACTTTGAAATAATAAAACCAATTAGCCGAGGTGCATTCGGAAGAGTTTTCCTTGCCCGCAAAAGAGCAACAGGAGATTCATTTGCCATAAAGGTTCTGAAAAAGGCTGATATGATCCGCAAAAATGCAGTTGAAAGTATTTTGGCTGAGCGAGACATTCTTATATCAGTTCAAAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACCTGTAGGGAAAACCTTTATTTGGTTATGGAATTTTTAAATGGTGGAGACCTTTATTCTCTATTGAGAAATCTAGGTTGTTTAGATGAAGATATGGCACGTGTGTATATAGCAGAAGTTGTGCTTGCATTGGAGTATTTGCATTCATTACATGTAATTCATCGAGACTTGAAGCCTGATAACTTGTTAATTGGTCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCCAAGGTCGGCCTTATTAACAGCACGGATGACTTGTCAACTTCATTTTCTACTGATGATCTTGTAGGAAATGATGAACCGAAAAAAGATCATTCTTCAAAAGTGGAACAACGTCAAAAGCAGTCAGTTGTTGGCACCCCAGATTATTTGGCACCTGAAATACTTCTCGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCTGTTGGTGTTATACTATATGAGCTCCTTGTGGGTATTCCACCATTTAATGCAGCACATCCACAGGAAATTTTTGACAAAATAATTAATAGAGACATACAGTGGCCAAATATACCTGAGGAGATGAGCTATGAAGCATATGATTTGATTGACAAATTACTCACAGAGAATTCAGTCCAACGATTGGGTGCAACAGGAGCTGGTGAGGTTAAAGGTCACCCCTTCTTCAAGGATATTAATTGGGATACCCTAGCAAGACAGAAGGCTGCGTTTATACCATCAGCTGAAAATCATGACACAAGTTATTTCATGAGCCGCTACATATGGAACCCAGACGATGAACATCTTACTGGGGGTAGTGATTTTGATGACCTGACTGATTCCTGCTTCAGTGGTTCAGGCAGCGACTTTATAGATGAAGATGGGGATGAATGTGGTAGCTTAGCAGATTTTAGTGGACCACCTCCTGAAGTGCAGTACTCATTTAGTAATTTTTCTTTTAAGAATTTGTCTCAGTTAGCATCTATCAATTATGATTTGGTGATCAAGAATGCCAAGGAATCATCCGATGACTCCAAACCATCCGCATCATGA 3507 0.4206 MSSNSLPPSHLSDILPAKPTGNNGSPSKTSSRAKLQKSPPVPNWWTPVEEEGDQRNIEEAMRKIEQQQIEDAASSILLASSLGLNHIRTRSDSPRLRFAPLVNAPTSPRKDSVGTDDRTNGKRIYGTHGKLSRAPSHAVPLMQVGNDDTFAKELQSPRVQAILRVTSGRKKKIDFKSYSHELNSKGVKAFPVWRSRAILGHMEEITVAIRTKFGKLKEEVDSDLSAFAGDLVDLLDKFSKSHPEWIESLEDLLIIARRCAKMSPSEFWMNCEAIVQDLDDRRQELPIGILKQAHTRLLFILSRCTRLVQFNKENVHDQEHVLCLHQLSDVGIYREHILNAVEHNKFIGDEEQPTKSHGKESDNDQIINQIQIDRQHVSTATDTSRSGDSTGSGYKMSSWKKFPSRADKRCKHKVHEEQGQVHEVKEENVENVDTDSSNPELSSGGHKLHWGFWGDHHNLTYENSMICRICEVEIPIVYVEEHSQICTIADRCDLKGLTVSERLERFAETIEKIIESWTPRSTPKSTPKSTPRSTDGPAGEVSFEDARLSTSSLLDEFNDLSLIERNSLSRRGSEDMLDSVPEDDDNAFVGDHHDLSLSPKMSDETYFKHDQYSKLSSVGSLTPRSPLLTPRTSQVEMLLNARRTVLELDSYFQINKLVEIARSVAHVNDYNYVSRRIEELNLTIQARKVDALIVETFGRRIETLLAEKYLTLCHQIDNEKGDSSNGLVEEESSVEDDTVRSLRASPIHHSSRDRTSIEDFEIIKPISRGAFGRVFLARKRATGDSFAIKVLKKADMIRKNAVESILAERDILISVQNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLHVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSTSFSTDDLVGNDEPKKDHSSKVEQRQKQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAAHPQEIFDKIINRDIQWPNIPEEMSYEAYDLIDKLLTENSVQRLGATGAGEVKGHPFFKDINWDTLARQKAAFIPSAENHDTSYFMSRYIWNPDDEHLTGGSDFDDLTDSCFSGSGSDFIDEDGDECGSLADFSGPPPEVQYSFSNFSFKNLSQLASINYDLVIKNAKESSDDSKPSAS 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2444 1168 ProSiteProfiles AGC-kinase C-terminal domain profile. 1048 1148 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco01g2444 1168 Gene3D Transferase(Phosphotransferase) domain 1 844 1065 - -
Acco01g2444 1168 PANTHER SERINE/THREONINE-PROTEIN KINASE 381 1103 - -
Acco01g2444 1168 MobiDBLite consensus disorder prediction 373 397 - -
Acco01g2444 1168 Pfam Protein kinase domain 760 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2444 1168 MobiDBLite consensus disorder prediction 921 945 - -
Acco01g2444 1168 MobiDBLite consensus disorder prediction 373 399 - -
Acco01g2444 1168 MobiDBLite consensus disorder prediction 926 941 - -
Acco01g2444 1168 CDD STKc_MAST_like 766 1052 - -
Acco01g2444 1168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 879 891 IPR008271 GO:0004672|GO:0006468
Acco01g2444 1168 MobiDBLite consensus disorder prediction 99 130 - -
Acco01g2444 1168 MobiDBLite consensus disorder prediction 517 536 - -
Acco01g2444 1168 SMART serkin_6 760 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2444 1168 MobiDBLite consensus disorder prediction 517 542 - -
Acco01g2444 1168 Gene3D Phosphorylase Kinase; domain 1 758 1074 - -
Acco01g2444 1168 Coils Coil 50 70 - -
Acco01g2444 1168 MobiDBLite consensus disorder prediction 1 37 - -
Acco01g2444 1168 MobiDBLite consensus disorder prediction 1 52 - -
Acco01g2444 1168 FunFam probable serine/threonine protein kinase IREH1 758 847 - -
Acco01g2444 1168 ProSiteProfiles Protein kinase domain profile. 760 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2444 1168 SUPERFAMILY Protein kinase-like (PK-like) 757 1075 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2444 Acco-ChrAcco01 41349222 41368674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2444 35 1167 AGC Kinase Gene Family AT5G62310 59.356 0.0 1284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Acco01g2444 Pkinase 1.1e-63 CL0016