Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2384 ATGTCTCAAGGCAGTTCAGACCCTTCTTCGGCTTGCTGCTCAAGATCGGAGCATTTGGATTCAGCTTCAGCTGAGCTCAAGCTTTACCGAGCCTTCATTTTCTCTGTACCCATCTTCTTCACTTTCGTCCTGCTTTTTCTGTTCTACGTTTTCTACCTTCGACCTCGTAGGGTTGATTGGTCGTCTCTTAGGATGAGAGCGTTTGCGGCTGCGGAGGATAATGGCGGTAACTCCGGGCTTGAATTGGGTTTGAAGAAAGAACTGAGAGAGATGCTGCCGATTATCGTATACAAAGAAAGCTTCTCAGTTAAAGATACACAATGTTCTGTTTGCCTTTTAGACTACCAACCAGAAGACAAGCTTCAACAGATACCTGCATGTGGACATACATTTCACATGAGCTGCATCGATCTTTGGCTCACCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTTCTAGCTTCTGCCAAATCTTCAATTGAGACATCTAATTTACAGAGACAATCTGGTGATGAAGAAACACCAACTACACAATTCTCTGAATCAAGATCGACAACACGTCCAGATAATAGTGTTGCCCAGAGTTGCTCTAGAGATAATGCAAGTAGTGCCCAGTGCATTGATGTTGAAAGAGGAAATGCAGAAAGCAGTTAG 657 0.4505 MSQGSSDPSSACCSRSEHLDSASAELKLYRAFIFSVPIFFTFVLLFLFYVFYLRPRRVDWSSLRMRAFAAAEDNGGNSGLELGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQPEDKLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSIETSNLQRQSGDEETPTTQFSESRSTTRPDNSVAQSCSRDNASSAQCIDVERGNAESS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2384 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 155 IPR013083 -
Acco01g2384 218 SMART ring_2 108 149 IPR001841 -
Acco01g2384 218 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Acco01g2384 218 MobiDBLite consensus disorder prediction 163 218 - -
Acco01g2384 218 Pfam Ring finger domain 107 150 IPR001841 -
Acco01g2384 218 CDD RING-H2_EL5-like 107 150 - -
Acco01g2384 218 PANTHER OS11G0150450 PROTEIN 41 197 - -
Acco01g2384 218 SUPERFAMILY RING/U-box 92 154 - -
Acco01g2384 218 FunFam RING-H2 finger protein ATL7 74 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2384 Acco-ChrAcco01 40548800 40551485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2384 21 217 C3H Transcription Factor Family AT4G10150 52.500 1.76e-66 203