Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2383 ATGTCAATTATCCAAGGTTTGAAAGAAGCTTCATATGAAGAACTATGGAAGCTATGTGCTGGACCCTTGACCGATATCCCCCAAGTAGAACTTTTGACAAATCAAGAATTTGACCAGGGAATGATTCCTCATTTTAAGCTCCCCTCTCAGATTCTCTGTAGAGTTGTCAACATTCAGCTTTTGGCTGAACCAGAAACTGATGAAATATATGCAAGCATCACTCTGCTACCAGACTTTGAAAGTAATCCAAAAGTTCCGGATCCAAACCCACCTGAAACCCCTAAACAAGAATTGCAATCATTCTGTAAAATATTAACAGCCTCTGATATTAGCAAACGTGAAGGAGTTTTAGTTCTGCAGAAGCAAGCTGCTAAGTGCCTTCCTCAGCTGGACATGACGCAAAAAAATCCAACTCAAAAGTTGATTGCTAGAGATCTACATGGGTTTGAATGGAAGTTCAAACATGTATATAGAGACCAAGCAAAGACACATCTTCTCACAACTGGGTGGAGCAACTTTGTATCATCCAAAAGGTTGAATGCAGGAGATGCTCTCTTGTTCTTAAGGGGACCAAATGATAATGACTTATGGTGTGGTGTTAAGCATCTAATAAGGCAACAGACTCCTGTTCAATCATCTGTGATCTCAAGCCAATGCATGCACCTAGGAGTTCTTTCAACTGCCTCACATGCTATCATGACTGGCTCTATGTTTGTAGTCTATTACAAGCCAAGGATTAGCCAGTTCATTGTTCGCTTGAACAAATATCTCAAGGCAGTGAACAAAAACTTTTCTGTTAGCATGCCATTTATGATGGGATTTGAGGGACATGACTCACTTGAGATATTAAGGTTTTCAGGTACTATTGTTGGTGTGGGGGATTTCTCTCCAGCATGGCCTATGTCTCAATGGAAGTCATTAAAGGTTCAATGGCACGAACCGGCGGTGATTCCGATACCCGAGAGGATTTCCCCTTGGGAAATAGAGCCCTTTTCGCCTTCTACATTTGCGAACACTTCTCGGTTAATAGCAGTAAAGAACAATAGGCTTAGGCCTGTTAATATCTCATATTTCGGAATTTCCAGCTCAAATACTCCACCATTAAACACCAAGAGTAGCTCAAGGATGAGAGTGGATGGAACATGGCCAAATTCTCCATTGTCGCATGTCTCTTCAAGCTTTTCTTATGAGCCAAGAAACAATGAAACTAGTACATCAACACAGGCTTCTGTCTCTGGTTATGCTCCTTTTTCAATGAGGCTTAACAATGGCGAACATGATGAGGTTGAAAATGAGGATGAAAGTGGGAGCTCCAAGAATCTAAATTGTTTGTGTCAAATTTTAAGTAAACTGTGCGTGTGA 1362 0.4097 MSIIQGLKEASYEELWKLCAGPLTDIPQVELLTNQEFDQGMIPHFKLPSQILCRVVNIQLLAEPETDEIYASITLLPDFESNPKVPDPNPPETPKQELQSFCKILTASDISKREGVLVLQKQAAKCLPQLDMTQKNPTQKLIARDLHGFEWKFKHVYRDQAKTHLLTTGWSNFVSSKRLNAGDALLFLRGPNDNDLWCGVKHLIRQQTPVQSSVISSQCMHLGVLSTASHAIMTGSMFVVYYKPRISQFIVRLNKYLKAVNKNFSVSMPFMMGFEGHDSLEILRFSGTIVGVGDFSPAWPMSQWKSLKVQWHEPAVIPIPERISPWEIEPFSPSTFANTSRLIAVKNNRLRPVNISYFGISSSNTPPLNTKSSSRMRVDGTWPNSPLSHVSSSFSYEPRNNETSTSTQASVSGYAPFSMRLNNGEHDEVENEDESGSSKNLNCLCQILSKLCV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2383 453 MobiDBLite consensus disorder prediction 391 417 - -
Acco01g2383 453 Pfam B3 DNA binding domain 101 197 IPR003340 GO:0003677
Acco01g2383 453 CDD B3_DNA 100 200 IPR003340 GO:0003677
Acco01g2383 453 FunFam Auxin response factor 263 335 - -
Acco01g2383 453 Pfam Auxin response factor 228 308 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco01g2383 453 SUPERFAMILY DNA-binding pseudobarrel domain 92 230 IPR015300 -
Acco01g2383 453 FunFam Auxin response factor 99 204 - -
Acco01g2383 453 MobiDBLite consensus disorder prediction 391 421 - -
Acco01g2383 453 SMART B3_2 101 201 IPR003340 GO:0003677
Acco01g2383 453 Gene3D - 263 336 - -
Acco01g2383 453 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 383 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco01g2383 453 Gene3D - 98 202 IPR015300 -
Acco01g2383 453 ProSiteProfiles B3 DNA-binding domain profile. 101 204 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2383 Acco-ChrAcco01 40539489 40544439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2383 12 354 B3 DNA Binding Superfamily AT2G46530 53.203 7.95e-126 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco01g2383 B3 3.3e-16 CL0405