Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2382 ATGGAGGGAAGCCTTCAAGAATTTGGTTTGAAAGAAGCTTCATATGAAGAACTATGGAAGCTATGTGCTGGACCCTTGACCGATATCCCCCAAGTAGAACTTTTGACAAATCAAGAATTTGACCAGGGAATGATTCCTCATTTTAAGCTCCCCTCTCAGATTCTCTGTAGAGTTGTCAACATTCAGCTTTTGGCTGAACCAGAAACTGATGAAATATATGCAAGCATCACTCTGCTACCAGACTTTGAAAGTAATCCAAAAGTTCCGGATCCAAACCCACCTAAAACCCCTAAACAAGAATTGCAATCATTCTGTAAAATATTAACAGCCTCTGATATTAGCAAACATGAAGGAGTTTTAGTTCTGCAGAAGCATGCTGCTAAGTACCTTCCTCAGCTGGACATGACTAAAAAAAATCCAACTCAAGAGTTGGTTGCTAGAGATCTACATGGGTTTGAATGGAAGCTCAAACATGTATATAGAGACCAAGCAAAGACACATCTTCTCACAAATGGGTGGAGCAACTTTGTATCATCCAAAAGGTTGAATGTAGGAGATGCTCTCTTGTTCTTAAGGGGACCAAATGATAATGATCTATGGTGTGGTGTTAAGCATCTAACAAGGCAACAGAGTCCTGTTCAATCATCTGTGATCTCTAGCCAATGCATGCACCTTGGAGTTCTTTCAACTGCCTCACATGCTATCATGACTGGCTCTATGTTTGCAGTCTATTACAAGCCAAGGATTAGCCAATTCATTGTTCGCTTGAACAAATATTTAGAGGCAGTGAACAAAAACCTTTTTGTTGGCATGCCATTTATGATGAGATTTGAGGGACATGGCTCACTTGAGATATTAAGGTACTATTGTTGGTGTTGGGGATTTCTCTCCGGCTTGGCATGTGTCTCAATGGAAGTGAAGTCGTTAAAGGTTCAATGGCACGAACCTGCAGCAATTCCGAGGCCCGAGAGGATTTCCCCTTGGGAAATAGAGCCATTTACACCTTTTGCATTTGCAAACACTTCTCGATCAACAGTAGTAAAGAACAGAAGGCTTAGGCCTGTTAATATCTCATCTTCCGGAATTGATTCCAGCTCAACTACTTCTCCACCATTAAACACCAATAGTAGCTCAAGGATGAGAGTGGACGGAGTACGGCCAAATTCTCCACTGTTGCGTGTCTCTTCAAGCTTTGCTTATAAGCCAAGAAACAACGAAGCCAGTACATCAACACAAGCTTCTACCTCTGGTTATGCTCCTGTTTCAAGGAGGCTTAACAATGGCGAACATGATCAGGTTGAAAATGAGGATGAAAGTGGGAGCTCCAAGAGCTCCTTCACAGCCCTTCCAAACTTGGATTGGCTAAAAGGGTTGGAGCTTGAGAATATAAACCTGGCTCCTGGGCGAACAAGAGAGATGGTGGAGGAAGCAAATCTTAGAGAAGAAGAAGAAGGCGTTGGATCAAGAAGCAGGAGAGATAAACAGGATGGAAGCAAGGCCGAGTTAATCATGGCGTCCGACAAAAAATAA 1530 0.4248 MEGSLQEFGLKEASYEELWKLCAGPLTDIPQVELLTNQEFDQGMIPHFKLPSQILCRVVNIQLLAEPETDEIYASITLLPDFESNPKVPDPNPPKTPKQELQSFCKILTASDISKHEGVLVLQKHAAKYLPQLDMTKKNPTQELVARDLHGFEWKLKHVYRDQAKTHLLTNGWSNFVSSKRLNVGDALLFLRGPNDNDLWCGVKHLTRQQSPVQSSVISSQCMHLGVLSTASHAIMTGSMFAVYYKPRISQFIVRLNKYLEAVNKNLFVGMPFMMRFEGHGSLEILRYYCWCWGFLSGLACVSMEVKSLKVQWHEPAAIPRPERISPWEIEPFTPFAFANTSRSTVVKNRRLRPVNISSSGIDSSSTTSPPLNTNSSSRMRVDGVRPNSPLLRVSSSFAYKPRNNEASTSTQASTSGYAPVSRRLNNGEHDQVENEDESGSSKSSFTALPNLDWLKGLELENINLAPGRTREMVEEANLREEEEGVGSRSRRDKQDGSKAELIMASDKK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2382 509 ProSiteProfiles B3 DNA-binding domain profile. 104 207 IPR003340 GO:0003677
Acco01g2382 509 Gene3D - 266 337 - -
Acco01g2382 509 MobiDBLite consensus disorder prediction 390 422 - -
Acco01g2382 509 Pfam B3 DNA binding domain 104 200 IPR003340 GO:0003677
Acco01g2382 509 CDD B3_DNA 103 203 IPR003340 GO:0003677
Acco01g2382 509 Pfam Auxin response factor 231 284 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco01g2382 509 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 434 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco01g2382 509 MobiDBLite consensus disorder prediction 474 509 - -
Acco01g2382 509 SMART B3_2 104 204 IPR003340 GO:0003677
Acco01g2382 509 SUPERFAMILY DNA-binding pseudobarrel domain 95 233 IPR015300 -
Acco01g2382 509 MobiDBLite consensus disorder prediction 357 447 - -
Acco01g2382 509 MobiDBLite consensus disorder prediction 357 383 - -
Acco01g2382 509 Gene3D - 101 205 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2382 Acco-ChrAcco01 40531731 40537121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2382 15 356 B3 DNA Binding Superfamily AT2G46530 49.862 5.51e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco01g2382 B3 1e-16 CL0405