Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2362 ATGCAGTACGACCATAGCCCGTGGCTTAGTGCTAATGAATTTGTATTATCCTATGAGCTTTTTGTGATAAGCTTAACCAACTTGACTGTATTTCATTTTCACATAAAGCCCGTATACTTGGTAGCTAGGGATTTGTGGTTGATGAATATTCCGGAATTTTGGCGCCATTGGGCATTAGATCGGGAAAAGAATGAAGCTTTGAACAGTGAGGCAAAAGCGGATGACTCTGTACAAATTCCAGAGATGGCTGTGAAGGATGGCCAAGACCCTCGTATAGCAAACATCTCCTATGCAATCCGAGTCATCCCAAATTTTCCCAAGCCAGATATAACAACCTTGCTTCTTGATACACAAAGGCTTTCAAGGGCACGATTGATTTGTTTGTGGAGAGATATCGAGATAAAAATATCTCTGTTGTGGCAGGTCCGTGTCGCATTCAACTCCCAGAGGAAGAGAGAGACAGCCAGACGTCGATGGCGCTGGAAGCCTTTGTTTTCCCTCAGGAGCACTCCTTTGGCTATGGCGCTTCCAAAGACTTCTATCCTCTCTGGCCCTTTCATGACGATTTCAACCTTCCCAAACACCAAGACCACCTCAATTTCCTCCACAGCTAGCCAAACAGAACCTTATGGCTTCGGAGACTGGAGCTCCTCTGTGTTGCCCCACTCCAGCGAACTCGTATATGATACAGCCAGACGTCGATGGCGCTGGAAGCCTTTGTTTTCCCTCAGGAGCACTCCTTTGGCTATGGCGCTTCCAAAGACTTCTATCCTCTCTGGCCCTTTCATGACGATTTCAACCTTCCCAAACACCAAGACCACCTCAATTTCCTCCACAGCTAGCCAAACAGAACCTTATGGCTTCGGAGACTGGAGCTCCTCTGTGTTGCCCCACTCCAGCGAACTCGTATATGATGGCCAGGACCCGCAAGAACACGCAGGAGATCGAGAACCAGAGAATGACGCTCACATTGCTGTGGAGCACAATCGAAGAAAGCAGATGAACGACTATCTCTCTTTTCTTCGCTCTCTCATGCCCGACTCCTACGTCCAAAGGGGAGATCAGGCTTCCATAATTGGAGGGGCAATTAACTTTGTGAAGGAGCTGGAGCAGAGGCTTCAGTTTCTAGGCGCGCGGCCAGAAAGTAACAGGGGCCCCTTCTACGAGTTCTTCTCGTTTCCTCAGTATTCGACGAGCTCCAGCGGCGAGTGTTCGGCGGCCAAAGTGGGGGAGGTCTCGTCGGAGGTGAGTATCGCAGATATAGAAGTGACGGTAGTGGAGAGCCACGCCAATCTGAAAATAAGGACGAGGAAGAGGACGAAGCAGCTGTTGAAGATGGTGTCTGCGTTGTACAACATGCGTCTCACAATCTTGCATCTCAATGTGACGACCACCGCCGATATTGTGCTCTACTGCATCAGCGTCAAGTTGGAAGGAGAGTGCAAGCTGGGATCAGTGGAGGAGATCGCCGGGGCAGTGCACAACACGTTGGAGAGGATCGAACAAGAGAGTGCGCAGAATGAAGATCCTAACACCAGCTAG 1542 0.4961 MQYDHSPWLSANEFVLSYELFVISLTNLTVFHFHIKPVYLVARDLWLMNIPEFWRHWALDREKNEALNSEAKADDSVQIPEMAVKDGQDPRIANISYAIRVIPNFPKPDITTLLLDTQRLSRARLICLWRDIEIKISLLWQVRVAFNSQRKRETARRRWRWKPLFSLRSTPLAMALPKTSILSGPFMTISTFPNTKTTSISSTASQTEPYGFGDWSSSVLPHSSELVYDTARRRWRWKPLFSLRSTPLAMALPKTSILSGPFMTISTFPNTKTTSISSTASQTEPYGFGDWSSSVLPHSSELVYDGQDPQEHAGDREPENDAHIAVEHNRRKQMNDYLSFLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQFLGARPESNRGPFYEFFSFPQYSTSSSGECSAAKVGEVSSEVSIADIEVTVVESHANLKIRTRKRTKQLLKMVSALYNMRLTILHLNVTTTADIVLYCISVKLEGECKLGSVEEIAGAVHNTLERIEQESAQNEDPNTS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2362 513 SMART finulus 324 375 IPR011598 GO:0046983
Acco01g2362 513 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 369 IPR011598 GO:0046983
Acco01g2362 513 Pfam Helix-loop-helix DNA-binding domain 322 370 IPR011598 GO:0046983
Acco01g2362 513 Gene3D - 311 383 IPR036638 GO:0046983
Acco01g2362 513 PANTHER MAX DIMERIZATION, MAD 313 504 - -
Acco01g2362 513 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 391 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2362 Acco-ChrAcco01 39999984 40005547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2362 323 477 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 53.757 1.90e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g2362 HLH 4.7e-07 No_clan