Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2344 ATGTCACGATTCCACAATGTGGATAATATGGAAATTTTTGAAACTAGGTGCAACAGGAACAGAGCAGTTCAGATTGCTAGTAAGTTGGATTTTCAGTTTATGGAACTTAAGGGATTTGGTGTTTGTGATCAGAAAAATCCGAATATAGTACATTGGCGTGAGCTGTGGCTGGCACTGTTTGAGTTGAGTGATCAGATACAGGGTCCATGGGCTCTTGGTGGAGATTTTAATGCTACTTTGACGGCGAATGAACGAAGTTCTGTGGGTGAGAATAGGGGCTCTGATAGAGAGTTCATTAATTTTGTTGATGCAGCTACTCTCAATGATCTCAGAAGTTGGAACAAGAATTTGTTCGATCATATGGAGAAGAGGAAACGTGAGCTAATTCGGCGTCTCAATGGAATTACCAAAGCCAAGAAACAATATGGGCTCTCAACAGAACTCCAAAATCTTCAAACCACCTTAATTATGGGGAGAGCTGGAGAGCGTTTTATTGCAGGAATCCTTACTGGCACCTCAGTCACAGATAGGGGGCCAAATGGTTGCCGCCGAATGAAGGTTAGACCAAATTTGGAGACAATTTGGGATCGAGGGATGCGTCAAGTGATGTTAGAAACTGATGCAAAAGAGTTCATTCTTAGGAATGCAAATTGTGTGGCCGATTTCCTTGCGAAAAAGGCTTTATTTGTTGTGACACGTTTTGATATGATATTTGTGTTCATCGCTAGAGTTAGAAGCTATATTAGAGCTAGATTAGGTCTCTATCCTTTTTCACCATCAAATTCAAAACTGTTATCTCTCCGAGCTCACCGGAGACGTACTGTTGAAGGCAAGGCGGCCTACATTAGAGGGGCTTCTCTTCTGCGCCACCACGCAGGTTGTGGATTGCTTTCCTTGAATAGCAGTGAAGTAATCAGGTTGCCTTTGCTTGTTTGTTTTCAGAGAAGTAGGAGGAGTGTTGATATCGTAATACTGCTATGTAGCATGGAAGTCCACTTAGATGATGAAAACAGGGGAATGGAAACCTCCGAGAATGTGAGTTTTAGCATGTATGAAGTTCAAACAATTGAAGATCCGTACAATGATGAGAGGTGTGGATTGTTGGGGAGTACTTCTCAGGCAGAGTTAGGCATTTGTGAGGACCATGCCATCCAAGAACCATACGAGGGTATGGAATTTGAATCTGAAGATGCTGCTAAAATATTCTATGATGAATATGCTCGACGTGTAGGGTTTGTCATGCGGGTTATGTCTTGTAGACGCTCTGAAAGGGATGGAAGGATTCTCGCCCGCAGGCTTGGATGCAATAAGGAGGGTCACTGTGTCAGCATTCGAGGGAAATTCAGACCCATTCGAAAGCAAAGGCCAAGCACAAGAGAAGGTTGTAAGGCAATGATTCATGTCAAATATAATAAGTCTGGAAAATGGGCGATAACTAAGTTTGTAAAAGATCATAATCACCCATTGATAGTTTCTCCTCGCGAAGCTCGCCGAACAATGGATGAGAAGGATAAGAGAATACAGGAATTAACAGCAGAGCTTCGGAATAAAAAACGGCTGTGTGCTACATATCAAGAACAAGCGGGAGCTCTTGCACAAGAGGGAGCCTTTGCAATAAGAAACACGGATGGCTCCTCTTATTGTGCTGAAGTTGATGCAGTGCAATTTACTCAGGAATTTTTAACCAGACAACGTCTGTTTATGACTGGTCTCACCAGATTGATTCTAAAAGCGGAATGA 1740 0.4264 MSRFHNVDNMEIFETRCNRNRAVQIASKLDFQFMELKGFGVCDQKNPNIVHWRELWLALFELSDQIQGPWALGGDFNATLTANERSSVGENRGSDREFINFVDAATLNDLRSWNKNLFDHMEKRKRELIRRLNGITKAKKQYGLSTELQNLQTTLIMGRAGERFIAGILTGTSVTDRGPNGCRRMKVRPNLETIWDRGMRQVMLETDAKEFILRNANCVADFLAKKALFVVTRFDMIFVFIARVRSYIRARLGLYPFSPSNSKLLSLRAHRRRTVEGKAAYIRGASLLRHHAGCGLLSLNSSEVIRLPLLVCFQRSRRSVDIVILLCSMEVHLDDENRGMETSENVSFSMYEVQTIEDPYNDERCGLLGSTSQAELGICEDHAIQEPYEGMEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFRPIRKQRPSTREGCKAMIHVKYNKSGKWAITKFVKDHNHPLIVSPREARRTMDEKDKRIQELTAELRNKKRLCATYQEQAGALAQEGAFAIRNTDGSSYCAEVDAVQFTQEFLTRQRLFMTGLTRLILKAE 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2344 579 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 335 527 - -
Acco01g2344 579 Gene3D Endonuclease/exonuclease/phosphatase 6 132 IPR036691 -
Acco01g2344 579 Pfam FAR1 DNA-binding domain 402 490 IPR004330 -
Acco01g2344 579 Coils Coil 500 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2344 Acco-ChrAcco01 39737353 39749010 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco01g2344 FAR1 7.4e-28 CL0274